Gene : Eucgr.I00400 E. grandis v2.0
Defline:  (1 of 98) PF02362 - B3 DNA binding domain (B3) Genomic Order:  328
Name:  ? Eucgr.I00400 Secondary Identifier:  ? PAC:32062997
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00400 0.5kb upstream 0.5kb upstream 1121 true Chr09: 7867539-7868659 Eucalyptus grandis
Eucgr.I00400 0.5kb upstream 0.5kb upstream 500 false Chr09: 7867539-7868038 Eucalyptus grandis
Eucgr.I00400 0.5kb downstream 0.5kb downstream 1121 true Chr09: 7868039-7869159 Eucalyptus grandis
Eucgr.I00400 0.5kb downstream 0.5kb downstream 500 false Chr09: 7868660-7869159 Eucalyptus grandis
Eucgr.I00400 1.0kb upstream 1.0kb upstream 1621 true Chr09: 7867039-7868659 Eucalyptus grandis
Eucgr.I00400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7867039-7868038 Eucalyptus grandis
Eucgr.I00400 1.0kb downstream 1.0kb downstream 1621 true Chr09: 7868039-7869659 Eucalyptus grandis
Eucgr.I00400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7868660-7869659 Eucalyptus grandis
Eucgr.I00400 2.0kb upstream 2.0kb upstream 2621 true Chr09: 7866039-7868659 Eucalyptus grandis
Eucgr.I00400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7866039-7868038 Eucalyptus grandis
Eucgr.I00400 2.0kb downstream 2.0kb downstream 2621 true Chr09: 7868039-7870659 Eucalyptus grandis
Eucgr.I00400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7868660-7870659 Eucalyptus grandis
Eucgr.I00400 5.0kb upstream 5.0kb upstream 5621 true Chr09: 7863039-7868659 Eucalyptus grandis
Eucgr.I00400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7863039-7868038 Eucalyptus grandis
Eucgr.I00400 5.0kb downstream 5.0kb downstream 5621 true Chr09: 7868039-7873659 Eucalyptus grandis
Eucgr.I00400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7868660-7873659 Eucalyptus grandis
Eucgr.I00400 10.0kb upstream 10.0kb upstream 10621 true Chr09: 7858039-7868659 Eucalyptus grandis
Eucgr.I00400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7858039-7868038 Eucalyptus grandis
Eucgr.I00400 10.0kb downstream 10.0kb downstream 10621 true Chr09: 7868039-7878659 Eucalyptus grandis
Eucgr.I00400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7868660-7878659 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074225 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.06628 0.0 9.89685    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.08174 0.0 7.11051    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain