Gene : Eucgr.I00411 E. grandis v2.0
Defline:  (1 of 7) PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Genomic Order:  336
Name:  ? Eucgr.I00411 Secondary Identifier:  ? PAC:32063541
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00411 0.5kb upstream 0.5kb upstream 1173 true Chr09: 7997671-7998843 Eucalyptus grandis
Eucgr.I00411 0.5kb upstream 0.5kb upstream 500 false Chr09: 7997671-7998170 Eucalyptus grandis
Eucgr.I00411 0.5kb downstream 0.5kb downstream 1173 true Chr09: 7998171-7999343 Eucalyptus grandis
Eucgr.I00411 0.5kb downstream 0.5kb downstream 500 false Chr09: 7998844-7999343 Eucalyptus grandis
Eucgr.I00411 1.0kb upstream 1.0kb upstream 1673 true Chr09: 7997171-7998843 Eucalyptus grandis
Eucgr.I00411 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7997171-7998170 Eucalyptus grandis
Eucgr.I00411 1.0kb downstream 1.0kb downstream 1673 true Chr09: 7998171-7999843 Eucalyptus grandis
Eucgr.I00411 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7998844-7999843 Eucalyptus grandis
Eucgr.I00411 2.0kb upstream 2.0kb upstream 2673 true Chr09: 7996171-7998843 Eucalyptus grandis
Eucgr.I00411 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7996171-7998170 Eucalyptus grandis
Eucgr.I00411 2.0kb downstream 2.0kb downstream 2673 true Chr09: 7998171-8000843 Eucalyptus grandis
Eucgr.I00411 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7998844-8000843 Eucalyptus grandis
Eucgr.I00411 5.0kb upstream 5.0kb upstream 5673 true Chr09: 7993171-7998843 Eucalyptus grandis
Eucgr.I00411 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7993171-7998170 Eucalyptus grandis
Eucgr.I00411 5.0kb downstream 5.0kb downstream 5673 true Chr09: 7998171-8003843 Eucalyptus grandis
Eucgr.I00411 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7998844-8003843 Eucalyptus grandis
Eucgr.I00411 10.0kb upstream 10.0kb upstream 10673 true Chr09: 7988171-7998843 Eucalyptus grandis
Eucgr.I00411 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7988171-7998170 Eucalyptus grandis
Eucgr.I00411 10.0kb downstream 10.0kb downstream 10673 true Chr09: 7998171-8008843 Eucalyptus grandis
Eucgr.I00411 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7998844-8008843 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029593 5273 Angiosperm View MSA
124064323 5270 Rosid View MSA
123746006 5271 Pentapetalae View MSA
122790595 5272 Eudicot View MSA
121298906 5274 Embryophyte View MSA
123336848 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.633668 0.0 2.36945    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain