Gene : Eucgr.I00378 E. grandis v2.0
Defline:  (1 of 1) PTHR23315:SF66 - CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 1 Genomic Order:  311
Name:  ? Eucgr.I00378 Secondary Identifier:  ? PAC:32063779
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00378 0.5kb upstream 0.5kb upstream 11855 true Chr09: 7138250-7150104 Eucalyptus grandis
Eucgr.I00378 0.5kb upstream 0.5kb upstream 500 false Chr09: 7138250-7138749 Eucalyptus grandis
Eucgr.I00378 0.5kb downstream 0.5kb downstream 11855 true Chr09: 7138750-7150604 Eucalyptus grandis
Eucgr.I00378 0.5kb downstream 0.5kb downstream 500 false Chr09: 7150105-7150604 Eucalyptus grandis
Eucgr.I00378 1.0kb upstream 1.0kb upstream 12355 true Chr09: 7137750-7150104 Eucalyptus grandis
Eucgr.I00378 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7137750-7138749 Eucalyptus grandis
Eucgr.I00378 1.0kb downstream 1.0kb downstream 12355 true Chr09: 7138750-7151104 Eucalyptus grandis
Eucgr.I00378 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7150105-7151104 Eucalyptus grandis
Eucgr.I00378 2.0kb upstream 2.0kb upstream 13355 true Chr09: 7136750-7150104 Eucalyptus grandis
Eucgr.I00378 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7136750-7138749 Eucalyptus grandis
Eucgr.I00378 2.0kb downstream 2.0kb downstream 13355 true Chr09: 7138750-7152104 Eucalyptus grandis
Eucgr.I00378 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7150105-7152104 Eucalyptus grandis
Eucgr.I00378 5.0kb upstream 5.0kb upstream 16355 true Chr09: 7133750-7150104 Eucalyptus grandis
Eucgr.I00378 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7133750-7138749 Eucalyptus grandis
Eucgr.I00378 5.0kb downstream 5.0kb downstream 16355 true Chr09: 7138750-7155104 Eucalyptus grandis
Eucgr.I00378 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7150105-7155104 Eucalyptus grandis
Eucgr.I00378 10.0kb upstream 10.0kb upstream 21355 true Chr09: 7128750-7150104 Eucalyptus grandis
Eucgr.I00378 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7128750-7138749 Eucalyptus grandis
Eucgr.I00378 10.0kb downstream 10.0kb downstream 21355 true Chr09: 7138750-7160104 Eucalyptus grandis
Eucgr.I00378 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7150105-7160104 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048106 5273 Angiosperm View MSA
124063700 5270 Rosid View MSA
123740295 5271 Pentapetalae View MSA
122787406 5272 Eudicot View MSA
121347002 5274 Embryophyte View MSA
123380478 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.9793 0.0 108.248 High  
cufflinks 128.623 0.0 523.494 High High
cufflinks 32.5587 0.0 95.6183 High Low
cufflinks 135.219 0.0 692.915 High High
cufflinks 59.1227 0.0 219.56 High  
cufflinks 48.8794 0.0 155.792 High  

0 Strain