Gene : Eucgr.I00313 E. grandis v2.0
Defline:  (1 of 1) PTHR10072:SF48 - IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC Genomic Order:  253
Name:  ? Eucgr.I00313 Secondary Identifier:  ? PAC:32064272
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00313 0.5kb upstream 0.5kb upstream 3871 true Chr09: 6009904-6013774 Eucalyptus grandis
Eucgr.I00313 0.5kb upstream 0.5kb upstream 500 false Chr09: 6013275-6013774 Eucalyptus grandis
Eucgr.I00313 0.5kb downstream 0.5kb downstream 3871 true Chr09: 6009404-6013274 Eucalyptus grandis
Eucgr.I00313 0.5kb downstream 0.5kb downstream 500 false Chr09: 6009404-6009903 Eucalyptus grandis
Eucgr.I00313 1.0kb upstream 1.0kb upstream 4371 true Chr09: 6009904-6014274 Eucalyptus grandis
Eucgr.I00313 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6013275-6014274 Eucalyptus grandis
Eucgr.I00313 1.0kb downstream 1.0kb downstream 4371 true Chr09: 6008904-6013274 Eucalyptus grandis
Eucgr.I00313 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6008904-6009903 Eucalyptus grandis
Eucgr.I00313 2.0kb upstream 2.0kb upstream 5371 true Chr09: 6009904-6015274 Eucalyptus grandis
Eucgr.I00313 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6013275-6015274 Eucalyptus grandis
Eucgr.I00313 2.0kb downstream 2.0kb downstream 5371 true Chr09: 6007904-6013274 Eucalyptus grandis
Eucgr.I00313 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6007904-6009903 Eucalyptus grandis
Eucgr.I00313 5.0kb upstream 5.0kb upstream 8371 true Chr09: 6009904-6018274 Eucalyptus grandis
Eucgr.I00313 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6013275-6018274 Eucalyptus grandis
Eucgr.I00313 5.0kb downstream 5.0kb downstream 8371 true Chr09: 6004904-6013274 Eucalyptus grandis
Eucgr.I00313 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6004904-6009903 Eucalyptus grandis
Eucgr.I00313 10.0kb upstream 10.0kb upstream 13371 true Chr09: 6009904-6023274 Eucalyptus grandis
Eucgr.I00313 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6013275-6023274 Eucalyptus grandis
Eucgr.I00313 10.0kb downstream 10.0kb downstream 13371 true Chr09: 5999904-6013274 Eucalyptus grandis
Eucgr.I00313 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5999904-6009903 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065003 5270 Rosid View MSA
123740000 5271 Pentapetalae View MSA
122792600 5272 Eudicot View MSA
122046362 5273 Angiosperm View MSA
121346119 5274 Embryophyte View MSA
123427871 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.0352 0.0 77.6494 High  
cufflinks 15.356 0.0 48.5021    
cufflinks 18.6931 0.0 52.9491    
cufflinks 21.4475 0.0 58.236    
cufflinks 13.8257 0.0 33.1886    
cufflinks 74.3826 0.0 167.944 High High

0 Strain