Gene : Eucgr.I00323 E. grandis v2.0
Defline:  (1 of 1) PTHR33471:SF5 - EXPRESSED PROTEIN Genomic Order:  263
Name:  ? Eucgr.I00323 Secondary Identifier:  ? PAC:32065624
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00323 0.5kb upstream 0.5kb upstream 4686 true Chr09: 6165088-6169773 Eucalyptus grandis
Eucgr.I00323 0.5kb upstream 0.5kb upstream 500 false Chr09: 6165088-6165587 Eucalyptus grandis
Eucgr.I00323 0.5kb downstream 0.5kb downstream 4686 true Chr09: 6165588-6170273 Eucalyptus grandis
Eucgr.I00323 0.5kb downstream 0.5kb downstream 500 false Chr09: 6169774-6170273 Eucalyptus grandis
Eucgr.I00323 1.0kb upstream 1.0kb upstream 5186 true Chr09: 6164588-6169773 Eucalyptus grandis
Eucgr.I00323 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6164588-6165587 Eucalyptus grandis
Eucgr.I00323 1.0kb downstream 1.0kb downstream 5186 true Chr09: 6165588-6170773 Eucalyptus grandis
Eucgr.I00323 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6169774-6170773 Eucalyptus grandis
Eucgr.I00323 2.0kb upstream 2.0kb upstream 6186 true Chr09: 6163588-6169773 Eucalyptus grandis
Eucgr.I00323 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6163588-6165587 Eucalyptus grandis
Eucgr.I00323 2.0kb downstream 2.0kb downstream 6186 true Chr09: 6165588-6171773 Eucalyptus grandis
Eucgr.I00323 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6169774-6171773 Eucalyptus grandis
Eucgr.I00323 5.0kb upstream 5.0kb upstream 9186 true Chr09: 6160588-6169773 Eucalyptus grandis
Eucgr.I00323 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6160588-6165587 Eucalyptus grandis
Eucgr.I00323 5.0kb downstream 5.0kb downstream 9186 true Chr09: 6165588-6174773 Eucalyptus grandis
Eucgr.I00323 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6169774-6174773 Eucalyptus grandis
Eucgr.I00323 10.0kb upstream 10.0kb upstream 14186 true Chr09: 6155588-6169773 Eucalyptus grandis
Eucgr.I00323 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6155588-6165587 Eucalyptus grandis
Eucgr.I00323 10.0kb downstream 10.0kb downstream 14186 true Chr09: 6165588-6179773 Eucalyptus grandis
Eucgr.I00323 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6169774-6179773 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026537 5273 Angiosperm View MSA
124062959 5270 Rosid View MSA
123740004 5271 Pentapetalae View MSA
122793582 5272 Eudicot View MSA
121345854 5274 Embryophyte View MSA
123426858 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7075 0.0 29.753    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.72047 0.0 10.3103   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 36.4705 0.0 82.0578 High  

0 Strain