Gene : Eucgr.I00242 E. grandis v2.0
Defline:  (1 of 2) 6.3.5.5 - Carbamoyl-phosphate synthase (glutamine-hydrolyzing) / Glutamine-dependent carbamyl phosphate synthetase Genomic Order:  191
Name:  ? Eucgr.I00242 Secondary Identifier:  ? PAC:32064061
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ARGSYNBSUB-PWY Eucalyptus grandis pathologic  
Egrandis ARGSYN-PWY Eucalyptus grandis pathologic  
Egrandis CITRULBIO-PWY Eucalyptus grandis pathologic  
Egrandis GLUTAMINDEG-PWY Eucalyptus grandis pathologic  
Egrandis PWY0-162 Eucalyptus grandis pathologic  
Egrandis PWY-4984 Eucalyptus grandis pathologic  
Egrandis PWY-5686 Eucalyptus grandis pathologic  
Egrandis PWY-7211 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00242 0.5kb upstream 0.5kb upstream 4584 true Chr09: 4919964-4924547 Eucalyptus grandis
Eucgr.I00242 0.5kb upstream 0.5kb upstream 500 false Chr09: 4924048-4924547 Eucalyptus grandis
Eucgr.I00242 0.5kb downstream 0.5kb downstream 4584 true Chr09: 4919464-4924047 Eucalyptus grandis
Eucgr.I00242 0.5kb downstream 0.5kb downstream 500 false Chr09: 4919464-4919963 Eucalyptus grandis
Eucgr.I00242 1.0kb upstream 1.0kb upstream 5084 true Chr09: 4919964-4925047 Eucalyptus grandis
Eucgr.I00242 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4924048-4925047 Eucalyptus grandis
Eucgr.I00242 1.0kb downstream 1.0kb downstream 5084 true Chr09: 4918964-4924047 Eucalyptus grandis
Eucgr.I00242 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4918964-4919963 Eucalyptus grandis
Eucgr.I00242 2.0kb upstream 2.0kb upstream 6084 true Chr09: 4919964-4926047 Eucalyptus grandis
Eucgr.I00242 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4924048-4926047 Eucalyptus grandis
Eucgr.I00242 2.0kb downstream 2.0kb downstream 6084 true Chr09: 4917964-4924047 Eucalyptus grandis
Eucgr.I00242 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4917964-4919963 Eucalyptus grandis
Eucgr.I00242 5.0kb upstream 5.0kb upstream 9084 true Chr09: 4919964-4929047 Eucalyptus grandis
Eucgr.I00242 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4924048-4929047 Eucalyptus grandis
Eucgr.I00242 5.0kb downstream 5.0kb downstream 9084 true Chr09: 4914964-4924047 Eucalyptus grandis
Eucgr.I00242 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4914964-4919963 Eucalyptus grandis
Eucgr.I00242 10.0kb upstream 10.0kb upstream 14084 true Chr09: 4919964-4934047 Eucalyptus grandis
Eucgr.I00242 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4924048-4934047 Eucalyptus grandis
Eucgr.I00242 10.0kb downstream 10.0kb downstream 14084 true Chr09: 4909964-4924047 Eucalyptus grandis
Eucgr.I00242 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4909964-4919963 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069141 5270 Rosid View MSA
123739104 5271 Pentapetalae View MSA
122788005 5272 Eudicot View MSA
122046797 5273 Angiosperm View MSA
121347244 5274 Embryophyte View MSA
123423822 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.0791 0.0 48.9581    
cufflinks 4.01706 0.0 9.99222   Low
cufflinks 18.7943 0.0 41.7917    
cufflinks 5.96747 0.0 14.2459    
cufflinks 7.72768 0.0 18.1015    
cufflinks 21.8316 0.0 48.463    

0 Strain