Gene : Eucgr.I01138 E. grandis v2.0
Defline:  (1 of 4) PTHR14379 - LIMKAIN B LKAP Genomic Order:  894
Name:  ? Eucgr.I01138 Secondary Identifier:  ? PAC:32065376
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01138 0.5kb upstream 0.5kb upstream 4851 true Chr09: 22462185-22467035 Eucalyptus grandis
Eucgr.I01138 0.5kb upstream 0.5kb upstream 500 false Chr09: 22466536-22467035 Eucalyptus grandis
Eucgr.I01138 0.5kb downstream 0.5kb downstream 4851 true Chr09: 22461685-22466535 Eucalyptus grandis
Eucgr.I01138 0.5kb downstream 0.5kb downstream 500 false Chr09: 22461685-22462184 Eucalyptus grandis
Eucgr.I01138 1.0kb upstream 1.0kb upstream 5351 true Chr09: 22462185-22467535 Eucalyptus grandis
Eucgr.I01138 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22466536-22467535 Eucalyptus grandis
Eucgr.I01138 1.0kb downstream 1.0kb downstream 5351 true Chr09: 22461185-22466535 Eucalyptus grandis
Eucgr.I01138 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22461185-22462184 Eucalyptus grandis
Eucgr.I01138 2.0kb upstream 2.0kb upstream 6351 true Chr09: 22462185-22468535 Eucalyptus grandis
Eucgr.I01138 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22466536-22468535 Eucalyptus grandis
Eucgr.I01138 2.0kb downstream 2.0kb downstream 6351 true Chr09: 22460185-22466535 Eucalyptus grandis
Eucgr.I01138 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22460185-22462184 Eucalyptus grandis
Eucgr.I01138 5.0kb upstream 5.0kb upstream 9351 true Chr09: 22462185-22471535 Eucalyptus grandis
Eucgr.I01138 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22466536-22471535 Eucalyptus grandis
Eucgr.I01138 5.0kb downstream 5.0kb downstream 9351 true Chr09: 22457185-22466535 Eucalyptus grandis
Eucgr.I01138 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22457185-22462184 Eucalyptus grandis
Eucgr.I01138 10.0kb upstream 10.0kb upstream 14351 true Chr09: 22462185-22476535 Eucalyptus grandis
Eucgr.I01138 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22466536-22476535 Eucalyptus grandis
Eucgr.I01138 10.0kb downstream 10.0kb downstream 14351 true Chr09: 22452185-22466535 Eucalyptus grandis
Eucgr.I01138 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22452185-22462184 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060923 5270 Rosid View MSA
123747384 5271 Pentapetalae View MSA
122791498 5272 Eudicot View MSA
122044167 5273 Angiosperm View MSA
121346389 5274 Embryophyte View MSA
123380376 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.7774 0.0 49.0101    
cufflinks 38.9509 0.0 94.3844    
cufflinks 19.8521 0.0 49.1147    
cufflinks 27.8978 0.0 75.1342    
cufflinks 54.4597 0.0 132.831 High High
cufflinks 19.8555 0.0 53.67    

0 Strain