Gene : Eucgr.I01147 E. grandis v2.0
Defline:  (1 of 1) PTHR11929:SF148 - GLYCOPROTEIN 3-ALPHA-L-FUCOSYLTRANSFERASE A-RELATED Genomic Order:  902
Name:  ? Eucgr.I01147 Secondary Identifier:  ? PAC:32062868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01147 0.5kb upstream 0.5kb upstream 5946 true Chr09: 22564402-22570347 Eucalyptus grandis
Eucgr.I01147 0.5kb upstream 0.5kb upstream 500 false Chr09: 22564402-22564901 Eucalyptus grandis
Eucgr.I01147 0.5kb downstream 0.5kb downstream 5946 true Chr09: 22564902-22570847 Eucalyptus grandis
Eucgr.I01147 0.5kb downstream 0.5kb downstream 500 false Chr09: 22570348-22570847 Eucalyptus grandis
Eucgr.I01147 1.0kb upstream 1.0kb upstream 6446 true Chr09: 22563902-22570347 Eucalyptus grandis
Eucgr.I01147 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22563902-22564901 Eucalyptus grandis
Eucgr.I01147 1.0kb downstream 1.0kb downstream 6446 true Chr09: 22564902-22571347 Eucalyptus grandis
Eucgr.I01147 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22570348-22571347 Eucalyptus grandis
Eucgr.I01147 2.0kb upstream 2.0kb upstream 7446 true Chr09: 22562902-22570347 Eucalyptus grandis
Eucgr.I01147 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22562902-22564901 Eucalyptus grandis
Eucgr.I01147 2.0kb downstream 2.0kb downstream 7446 true Chr09: 22564902-22572347 Eucalyptus grandis
Eucgr.I01147 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22570348-22572347 Eucalyptus grandis
Eucgr.I01147 5.0kb upstream 5.0kb upstream 10446 true Chr09: 22559902-22570347 Eucalyptus grandis
Eucgr.I01147 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22559902-22564901 Eucalyptus grandis
Eucgr.I01147 5.0kb downstream 5.0kb downstream 10446 true Chr09: 22564902-22575347 Eucalyptus grandis
Eucgr.I01147 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22570348-22575347 Eucalyptus grandis
Eucgr.I01147 10.0kb upstream 10.0kb upstream 15446 true Chr09: 22554902-22570347 Eucalyptus grandis
Eucgr.I01147 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22554902-22564901 Eucalyptus grandis
Eucgr.I01147 10.0kb downstream 10.0kb downstream 15446 true Chr09: 22564902-22580347 Eucalyptus grandis
Eucgr.I01147 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22570348-22580347 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060557 5270 Rosid View MSA
123740191 5271 Pentapetalae View MSA
122791370 5272 Eudicot View MSA
122045550 5273 Angiosperm View MSA
121349778 5274 Embryophyte View MSA
123427537 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.3991 0.0 82.3504 High  
cufflinks 28.3661 0.0 65.1952    
cufflinks 37.8824 0.0 103.402 High High
cufflinks 19.3941 0.0 48.1238    
cufflinks 16.9384 0.0 43.4151    
cufflinks 14.773 0.0 35.8384   Low

0 Strain