Gene : Eucgr.I01134 E. grandis v2.0
Defline:  (1 of 1) PTHR10509//PTHR10509:SF23 - O-METHYLTRANSFERASE-RELATED Genomic Order:  890
Name:  ? Eucgr.I01134 Secondary Identifier:  ? PAC:32065581
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1121 Eucalyptus grandis pathologic  
Egrandis PWY-361 Eucalyptus grandis pathologic  
Egrandis PWY-7498 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01134 0.5kb upstream 0.5kb upstream 2733 true Chr09: 22432108-22434840 Eucalyptus grandis
Eucgr.I01134 0.5kb upstream 0.5kb upstream 500 false Chr09: 22434341-22434840 Eucalyptus grandis
Eucgr.I01134 0.5kb downstream 0.5kb downstream 2733 true Chr09: 22431608-22434340 Eucalyptus grandis
Eucgr.I01134 0.5kb downstream 0.5kb downstream 500 false Chr09: 22431608-22432107 Eucalyptus grandis
Eucgr.I01134 1.0kb upstream 1.0kb upstream 3233 true Chr09: 22432108-22435340 Eucalyptus grandis
Eucgr.I01134 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22434341-22435340 Eucalyptus grandis
Eucgr.I01134 1.0kb downstream 1.0kb downstream 3233 true Chr09: 22431108-22434340 Eucalyptus grandis
Eucgr.I01134 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22431108-22432107 Eucalyptus grandis
Eucgr.I01134 2.0kb upstream 2.0kb upstream 4233 true Chr09: 22432108-22436340 Eucalyptus grandis
Eucgr.I01134 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22434341-22436340 Eucalyptus grandis
Eucgr.I01134 2.0kb downstream 2.0kb downstream 4233 true Chr09: 22430108-22434340 Eucalyptus grandis
Eucgr.I01134 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22430108-22432107 Eucalyptus grandis
Eucgr.I01134 5.0kb upstream 5.0kb upstream 7233 true Chr09: 22432108-22439340 Eucalyptus grandis
Eucgr.I01134 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22434341-22439340 Eucalyptus grandis
Eucgr.I01134 5.0kb downstream 5.0kb downstream 7233 true Chr09: 22427108-22434340 Eucalyptus grandis
Eucgr.I01134 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22427108-22432107 Eucalyptus grandis
Eucgr.I01134 10.0kb upstream 10.0kb upstream 12233 true Chr09: 22432108-22444340 Eucalyptus grandis
Eucgr.I01134 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22434341-22444340 Eucalyptus grandis
Eucgr.I01134 10.0kb downstream 10.0kb downstream 12233 true Chr09: 22422108-22434340 Eucalyptus grandis
Eucgr.I01134 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22422108-22432107 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070061 5270 Rosid View MSA
123746911 5271 Pentapetalae View MSA
122790683 5272 Eudicot View MSA
122043643 5273 Angiosperm View MSA
121346702 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.07857 0.0 20.2653    
cufflinks 511.492 0.0 1474.16 High High
cufflinks 9.59225 0.0 23.1135    
cufflinks 270.614 0.0 666.816 High  
cufflinks 97.1858 0.0 230.286 High  
cufflinks 11.5475 0.0 27.3569    

0 Strain