Gene : Eucgr.I01085 E. grandis v2.0
Defline:  (1 of 9) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  849
Name:  ? Eucgr.I01085 Secondary Identifier:  ? PAC:32064599
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01085 0.5kb upstream 0.5kb upstream 3408 true Chr09: 21725144-21728551 Eucalyptus grandis
Eucgr.I01085 0.5kb upstream 0.5kb upstream 500 false Chr09: 21728052-21728551 Eucalyptus grandis
Eucgr.I01085 0.5kb downstream 0.5kb downstream 3408 true Chr09: 21724644-21728051 Eucalyptus grandis
Eucgr.I01085 0.5kb downstream 0.5kb downstream 500 false Chr09: 21724644-21725143 Eucalyptus grandis
Eucgr.I01085 1.0kb upstream 1.0kb upstream 3908 true Chr09: 21725144-21729051 Eucalyptus grandis
Eucgr.I01085 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21728052-21729051 Eucalyptus grandis
Eucgr.I01085 1.0kb downstream 1.0kb downstream 3908 true Chr09: 21724144-21728051 Eucalyptus grandis
Eucgr.I01085 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21724144-21725143 Eucalyptus grandis
Eucgr.I01085 2.0kb upstream 2.0kb upstream 4908 true Chr09: 21725144-21730051 Eucalyptus grandis
Eucgr.I01085 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21728052-21730051 Eucalyptus grandis
Eucgr.I01085 2.0kb downstream 2.0kb downstream 4908 true Chr09: 21723144-21728051 Eucalyptus grandis
Eucgr.I01085 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21723144-21725143 Eucalyptus grandis
Eucgr.I01085 5.0kb upstream 5.0kb upstream 7908 true Chr09: 21725144-21733051 Eucalyptus grandis
Eucgr.I01085 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21728052-21733051 Eucalyptus grandis
Eucgr.I01085 5.0kb downstream 5.0kb downstream 7908 true Chr09: 21720144-21728051 Eucalyptus grandis
Eucgr.I01085 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21720144-21725143 Eucalyptus grandis
Eucgr.I01085 10.0kb upstream 10.0kb upstream 12908 true Chr09: 21725144-21738051 Eucalyptus grandis
Eucgr.I01085 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21728052-21738051 Eucalyptus grandis
Eucgr.I01085 10.0kb downstream 10.0kb downstream 12908 true Chr09: 21715144-21728051 Eucalyptus grandis
Eucgr.I01085 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21715144-21725143 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061371 5270 Rosid View MSA
123742255 5271 Pentapetalae View MSA
122789434 5272 Eudicot View MSA
122043427 5273 Angiosperm View MSA
121310121 5274 Embryophyte View MSA
123347696 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.6862 0.0 43.5682    
cufflinks 4.87253 0.0 11.61   Low
cufflinks 20.5528 0.0 45.4666    
cufflinks 3.74596 0.0 9.14284   Low
cufflinks 26.0039 0.0 57.5343    
cufflinks 23.1863 0.0 51.2751    

0 Strain