Gene : Eucgr.I01096 E. grandis v2.0
Defline:  (1 of 1) PTHR11076:SF12 - DNA REPAIR PROTEIN REV1 Genomic Order:  860
Name:  ? Eucgr.I01096 Secondary Identifier:  ? PAC:32063206
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01096 0.5kb upstream 0.5kb upstream 10174 true Chr09: 21801490-21811663 Eucalyptus grandis
Eucgr.I01096 0.5kb upstream 0.5kb upstream 500 false Chr09: 21801490-21801989 Eucalyptus grandis
Eucgr.I01096 0.5kb downstream 0.5kb downstream 10174 true Chr09: 21801990-21812163 Eucalyptus grandis
Eucgr.I01096 0.5kb downstream 0.5kb downstream 500 false Chr09: 21811664-21812163 Eucalyptus grandis
Eucgr.I01096 1.0kb upstream 1.0kb upstream 10674 true Chr09: 21800990-21811663 Eucalyptus grandis
Eucgr.I01096 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21800990-21801989 Eucalyptus grandis
Eucgr.I01096 1.0kb downstream 1.0kb downstream 10674 true Chr09: 21801990-21812663 Eucalyptus grandis
Eucgr.I01096 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21811664-21812663 Eucalyptus grandis
Eucgr.I01096 2.0kb upstream 2.0kb upstream 11674 true Chr09: 21799990-21811663 Eucalyptus grandis
Eucgr.I01096 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21799990-21801989 Eucalyptus grandis
Eucgr.I01096 2.0kb downstream 2.0kb downstream 11674 true Chr09: 21801990-21813663 Eucalyptus grandis
Eucgr.I01096 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21811664-21813663 Eucalyptus grandis
Eucgr.I01096 5.0kb upstream 5.0kb upstream 14674 true Chr09: 21796990-21811663 Eucalyptus grandis
Eucgr.I01096 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21796990-21801989 Eucalyptus grandis
Eucgr.I01096 5.0kb downstream 5.0kb downstream 14674 true Chr09: 21801990-21816663 Eucalyptus grandis
Eucgr.I01096 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21811664-21816663 Eucalyptus grandis
Eucgr.I01096 10.0kb upstream 10.0kb upstream 19674 true Chr09: 21791990-21811663 Eucalyptus grandis
Eucgr.I01096 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21791990-21801989 Eucalyptus grandis
Eucgr.I01096 10.0kb downstream 10.0kb downstream 19674 true Chr09: 21801990-21821663 Eucalyptus grandis
Eucgr.I01096 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21811664-21821663 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061575 5270 Rosid View MSA
123740211 5271 Pentapetalae View MSA
122789510 5272 Eudicot View MSA
122041911 5273 Angiosperm View MSA
121346043 5274 Embryophyte View MSA
123380311 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.11213 0.0 5.31579    
cufflinks 0.598507 0.0 1.69505 Low Low
cufflinks 2.59234 0.0 6.3563   High
cufflinks 0.905 0.0 2.45278    
cufflinks 0.5717 0.0 1.63455 Low Low
cufflinks 1.85331 0.0 4.75799    

0 Strain