Gene : Eucgr.I01097 E. grandis v2.0
Defline:  (1 of 18) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  861
Name:  ? Eucgr.I01097 Secondary Identifier:  ? PAC:32062771
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01097 0.5kb upstream 0.5kb upstream 1198 true Chr09: 21814560-21815757 Eucalyptus grandis
Eucgr.I01097 0.5kb upstream 0.5kb upstream 500 false Chr09: 21814560-21815059 Eucalyptus grandis
Eucgr.I01097 0.5kb downstream 0.5kb downstream 1198 true Chr09: 21815060-21816257 Eucalyptus grandis
Eucgr.I01097 0.5kb downstream 0.5kb downstream 500 false Chr09: 21815758-21816257 Eucalyptus grandis
Eucgr.I01097 1.0kb upstream 1.0kb upstream 1698 true Chr09: 21814060-21815757 Eucalyptus grandis
Eucgr.I01097 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21814060-21815059 Eucalyptus grandis
Eucgr.I01097 1.0kb downstream 1.0kb downstream 1698 true Chr09: 21815060-21816757 Eucalyptus grandis
Eucgr.I01097 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21815758-21816757 Eucalyptus grandis
Eucgr.I01097 2.0kb upstream 2.0kb upstream 2698 true Chr09: 21813060-21815757 Eucalyptus grandis
Eucgr.I01097 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21813060-21815059 Eucalyptus grandis
Eucgr.I01097 2.0kb downstream 2.0kb downstream 2698 true Chr09: 21815060-21817757 Eucalyptus grandis
Eucgr.I01097 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21815758-21817757 Eucalyptus grandis
Eucgr.I01097 5.0kb upstream 5.0kb upstream 5698 true Chr09: 21810060-21815757 Eucalyptus grandis
Eucgr.I01097 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21810060-21815059 Eucalyptus grandis
Eucgr.I01097 5.0kb downstream 5.0kb downstream 5698 true Chr09: 21815060-21820757 Eucalyptus grandis
Eucgr.I01097 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21815758-21820757 Eucalyptus grandis
Eucgr.I01097 10.0kb upstream 10.0kb upstream 10698 true Chr09: 21805060-21815757 Eucalyptus grandis
Eucgr.I01097 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21805060-21815059 Eucalyptus grandis
Eucgr.I01097 10.0kb downstream 10.0kb downstream 10698 true Chr09: 21815060-21825757 Eucalyptus grandis
Eucgr.I01097 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21815758-21825757 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027901 5273 Angiosperm View MSA
124072369 5270 Rosid View MSA
123749990 5271 Pentapetalae View MSA
122773402 5272 Eudicot View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.296686 0.0 1.10939 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.596524 0.0 2.03752    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.98933 0.0 8.45907   High

0 Strain