Gene : Eucgr.I01075 E. grandis v2.0
Defline:  (1 of 2) PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Genomic Order:  839
Name:  ? Eucgr.I01075 Secondary Identifier:  ? PAC:32062838
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01075 0.5kb upstream 0.5kb upstream 6037 true Chr09: 21669081-21675117 Eucalyptus grandis
Eucgr.I01075 0.5kb upstream 0.5kb upstream 500 false Chr09: 21674618-21675117 Eucalyptus grandis
Eucgr.I01075 0.5kb downstream 0.5kb downstream 6037 true Chr09: 21668581-21674617 Eucalyptus grandis
Eucgr.I01075 0.5kb downstream 0.5kb downstream 500 false Chr09: 21668581-21669080 Eucalyptus grandis
Eucgr.I01075 1.0kb upstream 1.0kb upstream 6537 true Chr09: 21669081-21675617 Eucalyptus grandis
Eucgr.I01075 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21674618-21675617 Eucalyptus grandis
Eucgr.I01075 1.0kb downstream 1.0kb downstream 6537 true Chr09: 21668081-21674617 Eucalyptus grandis
Eucgr.I01075 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21668081-21669080 Eucalyptus grandis
Eucgr.I01075 2.0kb upstream 2.0kb upstream 7537 true Chr09: 21669081-21676617 Eucalyptus grandis
Eucgr.I01075 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21674618-21676617 Eucalyptus grandis
Eucgr.I01075 2.0kb downstream 2.0kb downstream 7537 true Chr09: 21667081-21674617 Eucalyptus grandis
Eucgr.I01075 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21667081-21669080 Eucalyptus grandis
Eucgr.I01075 5.0kb upstream 5.0kb upstream 10537 true Chr09: 21669081-21679617 Eucalyptus grandis
Eucgr.I01075 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21674618-21679617 Eucalyptus grandis
Eucgr.I01075 5.0kb downstream 5.0kb downstream 10537 true Chr09: 21664081-21674617 Eucalyptus grandis
Eucgr.I01075 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21664081-21669080 Eucalyptus grandis
Eucgr.I01075 10.0kb upstream 10.0kb upstream 15537 true Chr09: 21669081-21684617 Eucalyptus grandis
Eucgr.I01075 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21674618-21684617 Eucalyptus grandis
Eucgr.I01075 10.0kb downstream 10.0kb downstream 15537 true Chr09: 21659081-21674617 Eucalyptus grandis
Eucgr.I01075 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21659081-21669080 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065184 5270 Rosid View MSA
123747124 5271 Pentapetalae View MSA
122796341 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.43672 0.0 21.3107   High
cufflinks 4.34507 0.0 10.4126    
cufflinks 8.22497 0.0 18.737    
cufflinks 3.79435 0.0 9.21918   Low
cufflinks 5.48258 0.0 12.8802    
cufflinks 9.06013 0.0 20.4962    

0 Strain