Gene : Eucgr.I01076 E. grandis v2.0
Defline:  (1 of 4) PF12767 - Transcriptional regulator of RNA polII, SAGA, subunit (SAGA-Tad1) Genomic Order:  840
Name:  ? Eucgr.I01076 Secondary Identifier:  ? PAC:32064944
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01076 0.5kb upstream 0.5kb upstream 1989 true Chr09: 21682978-21684966 Eucalyptus grandis
Eucgr.I01076 0.5kb upstream 0.5kb upstream 500 false Chr09: 21682978-21683477 Eucalyptus grandis
Eucgr.I01076 0.5kb downstream 0.5kb downstream 1989 true Chr09: 21683478-21685466 Eucalyptus grandis
Eucgr.I01076 0.5kb downstream 0.5kb downstream 500 false Chr09: 21684967-21685466 Eucalyptus grandis
Eucgr.I01076 1.0kb upstream 1.0kb upstream 2489 true Chr09: 21682478-21684966 Eucalyptus grandis
Eucgr.I01076 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21682478-21683477 Eucalyptus grandis
Eucgr.I01076 1.0kb downstream 1.0kb downstream 2489 true Chr09: 21683478-21685966 Eucalyptus grandis
Eucgr.I01076 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21684967-21685966 Eucalyptus grandis
Eucgr.I01076 2.0kb upstream 2.0kb upstream 3489 true Chr09: 21681478-21684966 Eucalyptus grandis
Eucgr.I01076 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21681478-21683477 Eucalyptus grandis
Eucgr.I01076 2.0kb downstream 2.0kb downstream 3489 true Chr09: 21683478-21686966 Eucalyptus grandis
Eucgr.I01076 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21684967-21686966 Eucalyptus grandis
Eucgr.I01076 5.0kb upstream 5.0kb upstream 6489 true Chr09: 21678478-21684966 Eucalyptus grandis
Eucgr.I01076 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21678478-21683477 Eucalyptus grandis
Eucgr.I01076 5.0kb downstream 5.0kb downstream 6489 true Chr09: 21683478-21689966 Eucalyptus grandis
Eucgr.I01076 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21684967-21689966 Eucalyptus grandis
Eucgr.I01076 10.0kb upstream 10.0kb upstream 11489 true Chr09: 21673478-21684966 Eucalyptus grandis
Eucgr.I01076 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21673478-21683477 Eucalyptus grandis
Eucgr.I01076 10.0kb downstream 10.0kb downstream 11489 true Chr09: 21683478-21694966 Eucalyptus grandis
Eucgr.I01076 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21684967-21694966 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060712 5270 Rosid View MSA
123743282 5271 Pentapetalae View MSA
122790089 5272 Eudicot View MSA
122050052 5273 Angiosperm View MSA
121311708 5274 Embryophyte View MSA
123348971 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.82292 0.0 18.7088    
cufflinks 5.02523 0.0 12.5   Low
cufflinks 10.4737 0.0 24.3539    
cufflinks 14.7754 0.0 33.4584   High
cufflinks 13.8099 0.0 31.5229    
cufflinks 5.01955 0.0 12.5978   Low

0 Strain