Gene : Eucgr.I00926 E. grandis v2.0
Defline:  (1 of 3) PTHR13161 - SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT Genomic Order:  720
Name:  ? Eucgr.I00926 Secondary Identifier:  ? PAC:32063107
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00926 0.5kb upstream 0.5kb upstream 6505 true Chr09: 18941399-18947903 Eucalyptus grandis
Eucgr.I00926 0.5kb upstream 0.5kb upstream 500 false Chr09: 18947404-18947903 Eucalyptus grandis
Eucgr.I00926 0.5kb downstream 0.5kb downstream 6505 true Chr09: 18940899-18947403 Eucalyptus grandis
Eucgr.I00926 0.5kb downstream 0.5kb downstream 500 false Chr09: 18940899-18941398 Eucalyptus grandis
Eucgr.I00926 1.0kb upstream 1.0kb upstream 7005 true Chr09: 18941399-18948403 Eucalyptus grandis
Eucgr.I00926 1.0kb upstream 1.0kb upstream 1000 false Chr09: 18947404-18948403 Eucalyptus grandis
Eucgr.I00926 1.0kb downstream 1.0kb downstream 7005 true Chr09: 18940399-18947403 Eucalyptus grandis
Eucgr.I00926 1.0kb downstream 1.0kb downstream 1000 false Chr09: 18940399-18941398 Eucalyptus grandis
Eucgr.I00926 2.0kb upstream 2.0kb upstream 8005 true Chr09: 18941399-18949403 Eucalyptus grandis
Eucgr.I00926 2.0kb upstream 2.0kb upstream 2000 false Chr09: 18947404-18949403 Eucalyptus grandis
Eucgr.I00926 2.0kb downstream 2.0kb downstream 8005 true Chr09: 18939399-18947403 Eucalyptus grandis
Eucgr.I00926 2.0kb downstream 2.0kb downstream 2000 false Chr09: 18939399-18941398 Eucalyptus grandis
Eucgr.I00926 5.0kb upstream 5.0kb upstream 11005 true Chr09: 18941399-18952403 Eucalyptus grandis
Eucgr.I00926 5.0kb upstream 5.0kb upstream 5000 false Chr09: 18947404-18952403 Eucalyptus grandis
Eucgr.I00926 5.0kb downstream 5.0kb downstream 11005 true Chr09: 18936399-18947403 Eucalyptus grandis
Eucgr.I00926 5.0kb downstream 5.0kb downstream 5000 false Chr09: 18936399-18941398 Eucalyptus grandis
Eucgr.I00926 10.0kb upstream 10.0kb upstream 16005 true Chr09: 18941399-18957403 Eucalyptus grandis
Eucgr.I00926 10.0kb upstream 10.0kb upstream 10000 false Chr09: 18947404-18957403 Eucalyptus grandis
Eucgr.I00926 10.0kb downstream 10.0kb downstream 16005 true Chr09: 18931399-18947403 Eucalyptus grandis
Eucgr.I00926 10.0kb downstream 10.0kb downstream 10000 false Chr09: 18931399-18941398 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066398 5270 Rosid View MSA
123739610 5271 Pentapetalae View MSA
122788896 5272 Eudicot View MSA
122044927 5273 Angiosperm View MSA
121350763 5274 Embryophyte View MSA
123425625 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.3914 0.0 118.936 High  
cufflinks 62.3692 0.0 176.045 High  
cufflinks 44.1983 0.0 123.953 High  
cufflinks 68.8416 0.0 214.828 High High
cufflinks 59.7297 0.0 168.453 High  
cufflinks 26.5365 0.0 64.8626   Low

0 Strain