Gene : Eucgr.I00742 E. grandis v2.0
Defline:  (1 of 1) PTHR22846 - WD40 REPEAT PROTEIN Genomic Order:  593
Name:  ? Eucgr.I00742 Secondary Identifier:  ? PAC:32063175
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00742 0.5kb upstream 0.5kb upstream 12961 true Chr09: 15304453-15317413 Eucalyptus grandis
Eucgr.I00742 0.5kb upstream 0.5kb upstream 500 false Chr09: 15316914-15317413 Eucalyptus grandis
Eucgr.I00742 0.5kb downstream 0.5kb downstream 12961 true Chr09: 15303953-15316913 Eucalyptus grandis
Eucgr.I00742 0.5kb downstream 0.5kb downstream 500 false Chr09: 15303953-15304452 Eucalyptus grandis
Eucgr.I00742 1.0kb upstream 1.0kb upstream 13461 true Chr09: 15304453-15317913 Eucalyptus grandis
Eucgr.I00742 1.0kb upstream 1.0kb upstream 1000 false Chr09: 15316914-15317913 Eucalyptus grandis
Eucgr.I00742 1.0kb downstream 1.0kb downstream 13461 true Chr09: 15303453-15316913 Eucalyptus grandis
Eucgr.I00742 1.0kb downstream 1.0kb downstream 1000 false Chr09: 15303453-15304452 Eucalyptus grandis
Eucgr.I00742 2.0kb upstream 2.0kb upstream 14461 true Chr09: 15304453-15318913 Eucalyptus grandis
Eucgr.I00742 2.0kb upstream 2.0kb upstream 2000 false Chr09: 15316914-15318913 Eucalyptus grandis
Eucgr.I00742 2.0kb downstream 2.0kb downstream 14461 true Chr09: 15302453-15316913 Eucalyptus grandis
Eucgr.I00742 2.0kb downstream 2.0kb downstream 2000 false Chr09: 15302453-15304452 Eucalyptus grandis
Eucgr.I00742 5.0kb upstream 5.0kb upstream 17461 true Chr09: 15304453-15321913 Eucalyptus grandis
Eucgr.I00742 5.0kb upstream 5.0kb upstream 5000 false Chr09: 15316914-15321913 Eucalyptus grandis
Eucgr.I00742 5.0kb downstream 5.0kb downstream 17461 true Chr09: 15299453-15316913 Eucalyptus grandis
Eucgr.I00742 5.0kb downstream 5.0kb downstream 5000 false Chr09: 15299453-15304452 Eucalyptus grandis
Eucgr.I00742 10.0kb upstream 10.0kb upstream 22461 true Chr09: 15304453-15326913 Eucalyptus grandis
Eucgr.I00742 10.0kb upstream 10.0kb upstream 10000 false Chr09: 15316914-15326913 Eucalyptus grandis
Eucgr.I00742 10.0kb downstream 10.0kb downstream 22461 true Chr09: 15294453-15316913 Eucalyptus grandis
Eucgr.I00742 10.0kb downstream 10.0kb downstream 10000 false Chr09: 15294453-15304452 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060920 5270 Rosid View MSA
123745818 5271 Pentapetalae View MSA
122787360 5272 Eudicot View MSA
122041857 5273 Angiosperm View MSA
121347223 5274 Embryophyte View MSA
123428047 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.8251 0.0 42.6309    
cufflinks 17.863 0.0 41.4282    
cufflinks 17.1222 0.0 43.1556    
cufflinks 12.0692 0.0 30.4707   Low
cufflinks 14.3958 0.0 32.9618    
cufflinks 15.6323 0.0 37.9894    

0 Strain