Gene : Eucgr.I01562 E. grandis v2.0
Defline:  (1 of 3) PTHR19919 - WD REPEAT CONTAINING PROTEIN Genomic Order:  1289
Name:  ? Eucgr.I01562 Secondary Identifier:  ? PAC:32063173
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01562 0.5kb upstream 0.5kb upstream 1559 true Chr09: 25535942-25537500 Eucalyptus grandis
Eucgr.I01562 0.5kb upstream 0.5kb upstream 500 false Chr09: 25535942-25536441 Eucalyptus grandis
Eucgr.I01562 0.5kb downstream 0.5kb downstream 1559 true Chr09: 25536442-25538000 Eucalyptus grandis
Eucgr.I01562 0.5kb downstream 0.5kb downstream 500 false Chr09: 25537501-25538000 Eucalyptus grandis
Eucgr.I01562 1.0kb upstream 1.0kb upstream 2059 true Chr09: 25535442-25537500 Eucalyptus grandis
Eucgr.I01562 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25535442-25536441 Eucalyptus grandis
Eucgr.I01562 1.0kb downstream 1.0kb downstream 2059 true Chr09: 25536442-25538500 Eucalyptus grandis
Eucgr.I01562 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25537501-25538500 Eucalyptus grandis
Eucgr.I01562 2.0kb upstream 2.0kb upstream 3059 true Chr09: 25534442-25537500 Eucalyptus grandis
Eucgr.I01562 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25534442-25536441 Eucalyptus grandis
Eucgr.I01562 2.0kb downstream 2.0kb downstream 3059 true Chr09: 25536442-25539500 Eucalyptus grandis
Eucgr.I01562 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25537501-25539500 Eucalyptus grandis
Eucgr.I01562 5.0kb upstream 5.0kb upstream 6059 true Chr09: 25531442-25537500 Eucalyptus grandis
Eucgr.I01562 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25531442-25536441 Eucalyptus grandis
Eucgr.I01562 5.0kb downstream 5.0kb downstream 6059 true Chr09: 25536442-25542500 Eucalyptus grandis
Eucgr.I01562 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25537501-25542500 Eucalyptus grandis
Eucgr.I01562 10.0kb upstream 10.0kb upstream 11059 true Chr09: 25526442-25537500 Eucalyptus grandis
Eucgr.I01562 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25526442-25536441 Eucalyptus grandis
Eucgr.I01562 10.0kb downstream 10.0kb downstream 11059 true Chr09: 25536442-25547500 Eucalyptus grandis
Eucgr.I01562 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25537501-25547500 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065960 5270 Rosid View MSA
123745660 5271 Pentapetalae View MSA
122791660 5272 Eudicot View MSA
122050418 5273 Angiosperm View MSA
121348109 5274 Embryophyte View MSA
123423806 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.3056 0.0 132.27 High High
cufflinks 25.8241 0.0 61.5322    
cufflinks 45.3461 0.0 103.338 High  
cufflinks 18.0754 0.0 45.0466    
cufflinks 12.9081 0.0 32.8066   Low
cufflinks 47.3171 0.0 105.82 High  

0 Strain