Gene : Eucgr.I01565 E. grandis v2.0
Defline:  (1 of 1) PTHR11766 - TYROSYL-TRNA SYNTHETASE Genomic Order:  1292
Name:  ? Eucgr.I01565 Secondary Identifier:  ? PAC:32064038
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis TRNA-CHARGING-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01565 0.5kb upstream 0.5kb upstream 1940 true Chr09: 25557935-25559874 Eucalyptus grandis
Eucgr.I01565 0.5kb upstream 0.5kb upstream 500 false Chr09: 25557935-25558434 Eucalyptus grandis
Eucgr.I01565 0.5kb downstream 0.5kb downstream 1940 true Chr09: 25558435-25560374 Eucalyptus grandis
Eucgr.I01565 0.5kb downstream 0.5kb downstream 500 false Chr09: 25559875-25560374 Eucalyptus grandis
Eucgr.I01565 1.0kb upstream 1.0kb upstream 2440 true Chr09: 25557435-25559874 Eucalyptus grandis
Eucgr.I01565 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25557435-25558434 Eucalyptus grandis
Eucgr.I01565 1.0kb downstream 1.0kb downstream 2440 true Chr09: 25558435-25560874 Eucalyptus grandis
Eucgr.I01565 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25559875-25560874 Eucalyptus grandis
Eucgr.I01565 2.0kb upstream 2.0kb upstream 3440 true Chr09: 25556435-25559874 Eucalyptus grandis
Eucgr.I01565 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25556435-25558434 Eucalyptus grandis
Eucgr.I01565 2.0kb downstream 2.0kb downstream 3440 true Chr09: 25558435-25561874 Eucalyptus grandis
Eucgr.I01565 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25559875-25561874 Eucalyptus grandis
Eucgr.I01565 5.0kb upstream 5.0kb upstream 6440 true Chr09: 25553435-25559874 Eucalyptus grandis
Eucgr.I01565 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25553435-25558434 Eucalyptus grandis
Eucgr.I01565 5.0kb downstream 5.0kb downstream 6440 true Chr09: 25558435-25564874 Eucalyptus grandis
Eucgr.I01565 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25559875-25564874 Eucalyptus grandis
Eucgr.I01565 10.0kb upstream 10.0kb upstream 11440 true Chr09: 25548435-25559874 Eucalyptus grandis
Eucgr.I01565 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25548435-25558434 Eucalyptus grandis
Eucgr.I01565 10.0kb downstream 10.0kb downstream 11440 true Chr09: 25558435-25569874 Eucalyptus grandis
Eucgr.I01565 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25559875-25569874 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066531 5270 Rosid View MSA
123740976 5271 Pentapetalae View MSA
122788187 5272 Eudicot View MSA
122042111 5273 Angiosperm View MSA
121344516 5274 Embryophyte View MSA
123424944 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.94433 0.0 12.4022    
cufflinks 3.42713 0.0 8.92231    
cufflinks 4.77687 0.0 12.0253    
cufflinks 0.441008 0.0 1.43432   Low
cufflinks 1.36249 0.0 3.89549    
cufflinks 5.82531 0.0 14.3506    

0 Strain