Gene : Eucgr.I01514 E. grandis v2.0
Defline:  (1 of 1) PTHR10183//PTHR10183:SF323 - CALPAIN Genomic Order:  1245
Name:  ? Eucgr.I01514 Secondary Identifier:  ? PAC:32064409
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01514 0.5kb upstream 0.5kb upstream 5882 true Chr09: 25229327-25235208 Eucalyptus grandis
Eucgr.I01514 0.5kb upstream 0.5kb upstream 500 false Chr09: 25234709-25235208 Eucalyptus grandis
Eucgr.I01514 0.5kb downstream 0.5kb downstream 5882 true Chr09: 25228827-25234708 Eucalyptus grandis
Eucgr.I01514 0.5kb downstream 0.5kb downstream 500 false Chr09: 25228827-25229326 Eucalyptus grandis
Eucgr.I01514 1.0kb upstream 1.0kb upstream 6382 true Chr09: 25229327-25235708 Eucalyptus grandis
Eucgr.I01514 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25234709-25235708 Eucalyptus grandis
Eucgr.I01514 1.0kb downstream 1.0kb downstream 6382 true Chr09: 25228327-25234708 Eucalyptus grandis
Eucgr.I01514 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25228327-25229326 Eucalyptus grandis
Eucgr.I01514 2.0kb upstream 2.0kb upstream 7382 true Chr09: 25229327-25236708 Eucalyptus grandis
Eucgr.I01514 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25234709-25236708 Eucalyptus grandis
Eucgr.I01514 2.0kb downstream 2.0kb downstream 7382 true Chr09: 25227327-25234708 Eucalyptus grandis
Eucgr.I01514 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25227327-25229326 Eucalyptus grandis
Eucgr.I01514 5.0kb upstream 5.0kb upstream 10382 true Chr09: 25229327-25239708 Eucalyptus grandis
Eucgr.I01514 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25234709-25239708 Eucalyptus grandis
Eucgr.I01514 5.0kb downstream 5.0kb downstream 10382 true Chr09: 25224327-25234708 Eucalyptus grandis
Eucgr.I01514 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25224327-25229326 Eucalyptus grandis
Eucgr.I01514 10.0kb upstream 10.0kb upstream 15382 true Chr09: 25229327-25244708 Eucalyptus grandis
Eucgr.I01514 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25234709-25244708 Eucalyptus grandis
Eucgr.I01514 10.0kb downstream 10.0kb downstream 15382 true Chr09: 25219327-25234708 Eucalyptus grandis
Eucgr.I01514 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25219327-25229326 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026886 5273 Angiosperm View MSA
124070268 5270 Rosid View MSA
123742343 5271 Pentapetalae View MSA
122770269 5272 Eudicot View MSA
121348180 5274 Embryophyte View MSA
123427497 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.3216 0.0 61.6908    
cufflinks 31.0805 0.0 85.3108    
cufflinks 23.6781 0.0 55.0328    
cufflinks 38.881 0.0 87.7009 High High
cufflinks 33.8171 0.0 76.6151    
cufflinks 18.0318 0.0 41.5534   Low

0 Strain