Gene : Eucgr.I01508 E. grandis v2.0
Defline:  (1 of 3) PTHR33734:SF5 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 Genomic Order:  1239
Name:  ? Eucgr.I01508 Secondary Identifier:  ? PAC:32064144
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01508 0.5kb upstream 0.5kb upstream 3540 true Chr09: 25190320-25193859 Eucalyptus grandis
Eucgr.I01508 0.5kb upstream 0.5kb upstream 500 false Chr09: 25190320-25190819 Eucalyptus grandis
Eucgr.I01508 0.5kb downstream 0.5kb downstream 3540 true Chr09: 25190820-25194359 Eucalyptus grandis
Eucgr.I01508 0.5kb downstream 0.5kb downstream 500 false Chr09: 25193860-25194359 Eucalyptus grandis
Eucgr.I01508 1.0kb upstream 1.0kb upstream 4040 true Chr09: 25189820-25193859 Eucalyptus grandis
Eucgr.I01508 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25189820-25190819 Eucalyptus grandis
Eucgr.I01508 1.0kb downstream 1.0kb downstream 4040 true Chr09: 25190820-25194859 Eucalyptus grandis
Eucgr.I01508 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25193860-25194859 Eucalyptus grandis
Eucgr.I01508 2.0kb upstream 2.0kb upstream 5040 true Chr09: 25188820-25193859 Eucalyptus grandis
Eucgr.I01508 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25188820-25190819 Eucalyptus grandis
Eucgr.I01508 2.0kb downstream 2.0kb downstream 5040 true Chr09: 25190820-25195859 Eucalyptus grandis
Eucgr.I01508 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25193860-25195859 Eucalyptus grandis
Eucgr.I01508 5.0kb upstream 5.0kb upstream 8040 true Chr09: 25185820-25193859 Eucalyptus grandis
Eucgr.I01508 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25185820-25190819 Eucalyptus grandis
Eucgr.I01508 5.0kb downstream 5.0kb downstream 8040 true Chr09: 25190820-25198859 Eucalyptus grandis
Eucgr.I01508 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25193860-25198859 Eucalyptus grandis
Eucgr.I01508 10.0kb upstream 10.0kb upstream 13040 true Chr09: 25180820-25193859 Eucalyptus grandis
Eucgr.I01508 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25180820-25190819 Eucalyptus grandis
Eucgr.I01508 10.0kb downstream 10.0kb downstream 13040 true Chr09: 25190820-25203859 Eucalyptus grandis
Eucgr.I01508 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25193860-25203859 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041196 5273 Angiosperm View MSA
124066383 5270 Rosid View MSA
123740270 5271 Pentapetalae View MSA
122790310 5272 Eudicot View MSA
121350262 5274 Embryophyte View MSA
123381651 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.6464 0.0 55.6428    
cufflinks 26.0454 0.0 58.5602    
cufflinks 18.6206 0.0 50.1843    
cufflinks 38.9656 0.0 88.2719 High High
cufflinks 32.6247 0.0 73.696    
cufflinks 10.951 0.0 25.8734   Low

0 Strain