Gene : Eucgr.I01461 E. grandis v2.0
Defline:  (1 of 503) PF01535 - PPR repeat (PPR) Genomic Order:  1195
Name:  ? Eucgr.I01461 Secondary Identifier:  ? PAC:32064902
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01461 0.5kb upstream 0.5kb upstream 2989 true Chr09: 24921351-24924339 Eucalyptus grandis
Eucgr.I01461 0.5kb upstream 0.5kb upstream 500 false Chr09: 24921351-24921850 Eucalyptus grandis
Eucgr.I01461 0.5kb downstream 0.5kb downstream 2989 true Chr09: 24921851-24924839 Eucalyptus grandis
Eucgr.I01461 0.5kb downstream 0.5kb downstream 500 false Chr09: 24924340-24924839 Eucalyptus grandis
Eucgr.I01461 1.0kb upstream 1.0kb upstream 3489 true Chr09: 24920851-24924339 Eucalyptus grandis
Eucgr.I01461 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24920851-24921850 Eucalyptus grandis
Eucgr.I01461 1.0kb downstream 1.0kb downstream 3489 true Chr09: 24921851-24925339 Eucalyptus grandis
Eucgr.I01461 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24924340-24925339 Eucalyptus grandis
Eucgr.I01461 2.0kb upstream 2.0kb upstream 4489 true Chr09: 24919851-24924339 Eucalyptus grandis
Eucgr.I01461 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24919851-24921850 Eucalyptus grandis
Eucgr.I01461 2.0kb downstream 2.0kb downstream 4489 true Chr09: 24921851-24926339 Eucalyptus grandis
Eucgr.I01461 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24924340-24926339 Eucalyptus grandis
Eucgr.I01461 5.0kb upstream 5.0kb upstream 7489 true Chr09: 24916851-24924339 Eucalyptus grandis
Eucgr.I01461 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24916851-24921850 Eucalyptus grandis
Eucgr.I01461 5.0kb downstream 5.0kb downstream 7489 true Chr09: 24921851-24929339 Eucalyptus grandis
Eucgr.I01461 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24924340-24929339 Eucalyptus grandis
Eucgr.I01461 10.0kb upstream 10.0kb upstream 12489 true Chr09: 24911851-24924339 Eucalyptus grandis
Eucgr.I01461 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24911851-24921850 Eucalyptus grandis
Eucgr.I01461 10.0kb downstream 10.0kb downstream 12489 true Chr09: 24921851-24934339 Eucalyptus grandis
Eucgr.I01461 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24924340-24934339 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063898 5270 Rosid View MSA
123736801 5271 Pentapetalae View MSA
122790461 5272 Eudicot View MSA
122047687 5273 Angiosperm View MSA
121347538 5274 Embryophyte View MSA
123380566 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.16988 0.0 5.60968   Low
cufflinks 2.6131 0.0 6.63461    
cufflinks 3.73158 0.0 9.1381    
cufflinks 4.99858 0.0 11.8924   High
cufflinks 3.64607 0.0 8.96412    
cufflinks 4.29342 0.0 10.3448    

0 Strain