Gene : Eucgr.I01426 E. grandis v2.0
Defline:  (1 of 12) PTHR11165 - SKP1 Genomic Order:  1162
Name:  ? Eucgr.I01426 Secondary Identifier:  ? PAC:32062588
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01426 0.5kb upstream 0.5kb upstream 9400 true Chr09: 24613155-24622554 Eucalyptus grandis
Eucgr.I01426 0.5kb upstream 0.5kb upstream 500 false Chr09: 24613155-24613654 Eucalyptus grandis
Eucgr.I01426 0.5kb downstream 0.5kb downstream 9400 true Chr09: 24613655-24623054 Eucalyptus grandis
Eucgr.I01426 0.5kb downstream 0.5kb downstream 500 false Chr09: 24622555-24623054 Eucalyptus grandis
Eucgr.I01426 1.0kb upstream 1.0kb upstream 9900 true Chr09: 24612655-24622554 Eucalyptus grandis
Eucgr.I01426 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24612655-24613654 Eucalyptus grandis
Eucgr.I01426 1.0kb downstream 1.0kb downstream 9900 true Chr09: 24613655-24623554 Eucalyptus grandis
Eucgr.I01426 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24622555-24623554 Eucalyptus grandis
Eucgr.I01426 2.0kb upstream 2.0kb upstream 10900 true Chr09: 24611655-24622554 Eucalyptus grandis
Eucgr.I01426 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24611655-24613654 Eucalyptus grandis
Eucgr.I01426 2.0kb downstream 2.0kb downstream 10900 true Chr09: 24613655-24624554 Eucalyptus grandis
Eucgr.I01426 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24622555-24624554 Eucalyptus grandis
Eucgr.I01426 5.0kb upstream 5.0kb upstream 13900 true Chr09: 24608655-24622554 Eucalyptus grandis
Eucgr.I01426 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24608655-24613654 Eucalyptus grandis
Eucgr.I01426 5.0kb downstream 5.0kb downstream 13900 true Chr09: 24613655-24627554 Eucalyptus grandis
Eucgr.I01426 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24622555-24627554 Eucalyptus grandis
Eucgr.I01426 10.0kb upstream 10.0kb upstream 18900 true Chr09: 24603655-24622554 Eucalyptus grandis
Eucgr.I01426 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24603655-24613654 Eucalyptus grandis
Eucgr.I01426 10.0kb downstream 10.0kb downstream 18900 true Chr09: 24613655-24632554 Eucalyptus grandis
Eucgr.I01426 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24622555-24632554 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124075311 5270 Rosid View MSA
123744391 5271 Pentapetalae View MSA
122796189 5272 Eudicot View MSA
122048755 5273 Angiosperm View MSA
121348588 5274 Embryophyte View MSA
123428431 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.531 0.0 77.3631    
cufflinks 7.87771 0.0 22.9849   Low
cufflinks 17.3078 0.0 55.4549    
cufflinks 15.4097 0.0 54.073    
cufflinks 48.0288 0.0 137.084 High High
cufflinks 18.9939 0.0 60.7461    

0 Strain