Gene : Eucgr.I01427 E. grandis v2.0
Defline:  (1 of 12) PTHR11165 - SKP1 Genomic Order:  1163
Name:  ? Eucgr.I01427 Secondary Identifier:  ? PAC:32063644
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01427 0.5kb upstream 0.5kb upstream 2327 true Chr09: 24628755-24631081 Eucalyptus grandis
Eucgr.I01427 0.5kb upstream 0.5kb upstream 500 false Chr09: 24628755-24629254 Eucalyptus grandis
Eucgr.I01427 0.5kb downstream 0.5kb downstream 2327 true Chr09: 24629255-24631581 Eucalyptus grandis
Eucgr.I01427 0.5kb downstream 0.5kb downstream 500 false Chr09: 24631082-24631581 Eucalyptus grandis
Eucgr.I01427 1.0kb upstream 1.0kb upstream 2827 true Chr09: 24628255-24631081 Eucalyptus grandis
Eucgr.I01427 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24628255-24629254 Eucalyptus grandis
Eucgr.I01427 1.0kb downstream 1.0kb downstream 2827 true Chr09: 24629255-24632081 Eucalyptus grandis
Eucgr.I01427 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24631082-24632081 Eucalyptus grandis
Eucgr.I01427 2.0kb upstream 2.0kb upstream 3827 true Chr09: 24627255-24631081 Eucalyptus grandis
Eucgr.I01427 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24627255-24629254 Eucalyptus grandis
Eucgr.I01427 2.0kb downstream 2.0kb downstream 3827 true Chr09: 24629255-24633081 Eucalyptus grandis
Eucgr.I01427 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24631082-24633081 Eucalyptus grandis
Eucgr.I01427 5.0kb upstream 5.0kb upstream 6827 true Chr09: 24624255-24631081 Eucalyptus grandis
Eucgr.I01427 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24624255-24629254 Eucalyptus grandis
Eucgr.I01427 5.0kb downstream 5.0kb downstream 6827 true Chr09: 24629255-24636081 Eucalyptus grandis
Eucgr.I01427 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24631082-24636081 Eucalyptus grandis
Eucgr.I01427 10.0kb upstream 10.0kb upstream 11827 true Chr09: 24619255-24631081 Eucalyptus grandis
Eucgr.I01427 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24619255-24629254 Eucalyptus grandis
Eucgr.I01427 10.0kb downstream 10.0kb downstream 11827 true Chr09: 24629255-24641081 Eucalyptus grandis
Eucgr.I01427 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24631082-24641081 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124075311 5270 Rosid View MSA
123744391 5271 Pentapetalae View MSA
122796189 5272 Eudicot View MSA
122048755 5273 Angiosperm View MSA
121348588 5274 Embryophyte View MSA
123428431 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.2091 0.0 60.9927    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 24.287 0.0 57.3922    
cufflinks 2.5211 0.0 7.52627    
cufflinks 1.76505 0.0 5.45941   Low
cufflinks 9.21852 0.0 23.6667    

0 Strain