Gene : Eucgr.I01404 E. grandis v2.0
Defline:  (1 of 4) PF06911 - Senescence-associated protein (Senescence) Genomic Order:  1140
Name:  ? Eucgr.I01404 Secondary Identifier:  ? PAC:32063654
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01404 0.5kb upstream 0.5kb upstream 4987 true Chr09: 24449941-24454927 Eucalyptus grandis
Eucgr.I01404 0.5kb upstream 0.5kb upstream 500 false Chr09: 24449941-24450440 Eucalyptus grandis
Eucgr.I01404 0.5kb downstream 0.5kb downstream 4987 true Chr09: 24450441-24455427 Eucalyptus grandis
Eucgr.I01404 0.5kb downstream 0.5kb downstream 500 false Chr09: 24454928-24455427 Eucalyptus grandis
Eucgr.I01404 1.0kb upstream 1.0kb upstream 5487 true Chr09: 24449441-24454927 Eucalyptus grandis
Eucgr.I01404 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24449441-24450440 Eucalyptus grandis
Eucgr.I01404 1.0kb downstream 1.0kb downstream 5487 true Chr09: 24450441-24455927 Eucalyptus grandis
Eucgr.I01404 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24454928-24455927 Eucalyptus grandis
Eucgr.I01404 2.0kb upstream 2.0kb upstream 6487 true Chr09: 24448441-24454927 Eucalyptus grandis
Eucgr.I01404 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24448441-24450440 Eucalyptus grandis
Eucgr.I01404 2.0kb downstream 2.0kb downstream 6487 true Chr09: 24450441-24456927 Eucalyptus grandis
Eucgr.I01404 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24454928-24456927 Eucalyptus grandis
Eucgr.I01404 5.0kb upstream 5.0kb upstream 9487 true Chr09: 24445441-24454927 Eucalyptus grandis
Eucgr.I01404 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24445441-24450440 Eucalyptus grandis
Eucgr.I01404 5.0kb downstream 5.0kb downstream 9487 true Chr09: 24450441-24459927 Eucalyptus grandis
Eucgr.I01404 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24454928-24459927 Eucalyptus grandis
Eucgr.I01404 10.0kb upstream 10.0kb upstream 14487 true Chr09: 24440441-24454927 Eucalyptus grandis
Eucgr.I01404 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24440441-24450440 Eucalyptus grandis
Eucgr.I01404 10.0kb downstream 10.0kb downstream 14487 true Chr09: 24450441-24464927 Eucalyptus grandis
Eucgr.I01404 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24454928-24464927 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072707 5270 Rosid View MSA
123750901 5271 Pentapetalae View MSA
122796418 5272 Eudicot View MSA
122046624 5273 Angiosperm View MSA
121350646 5274 Embryophyte View MSA
123428517 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.9689 0.0 66.1011    
cufflinks 18.4207 0.0 41.5852   Low
cufflinks 56.4805 0.0 135.698 High  
cufflinks 22.1151 0.0 49.5536    
cufflinks 90.268 0.0 253.808 High  
cufflinks 138.205 0.0 388.164 High High

0 Strain