Gene : Eucgr.I01379 E. grandis v2.0
Defline:  (1 of 1) PTHR32091:SF5 - GLYCINE-RICH PROTEIN Genomic Order:  1115
Name:  ? Eucgr.I01379 Secondary Identifier:  ? PAC:32063380
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01379 0.5kb upstream 0.5kb upstream 1622 true Chr09: 24206888-24208509 Eucalyptus grandis
Eucgr.I01379 0.5kb upstream 0.5kb upstream 500 false Chr09: 24206888-24207387 Eucalyptus grandis
Eucgr.I01379 0.5kb downstream 0.5kb downstream 1622 true Chr09: 24207388-24209009 Eucalyptus grandis
Eucgr.I01379 0.5kb downstream 0.5kb downstream 500 false Chr09: 24208510-24209009 Eucalyptus grandis
Eucgr.I01379 1.0kb upstream 1.0kb upstream 2122 true Chr09: 24206388-24208509 Eucalyptus grandis
Eucgr.I01379 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24206388-24207387 Eucalyptus grandis
Eucgr.I01379 1.0kb downstream 1.0kb downstream 2122 true Chr09: 24207388-24209509 Eucalyptus grandis
Eucgr.I01379 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24208510-24209509 Eucalyptus grandis
Eucgr.I01379 2.0kb upstream 2.0kb upstream 3122 true Chr09: 24205388-24208509 Eucalyptus grandis
Eucgr.I01379 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24205388-24207387 Eucalyptus grandis
Eucgr.I01379 2.0kb downstream 2.0kb downstream 3122 true Chr09: 24207388-24210509 Eucalyptus grandis
Eucgr.I01379 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24208510-24210509 Eucalyptus grandis
Eucgr.I01379 5.0kb upstream 5.0kb upstream 6122 true Chr09: 24202388-24208509 Eucalyptus grandis
Eucgr.I01379 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24202388-24207387 Eucalyptus grandis
Eucgr.I01379 5.0kb downstream 5.0kb downstream 6122 true Chr09: 24207388-24213509 Eucalyptus grandis
Eucgr.I01379 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24208510-24213509 Eucalyptus grandis
Eucgr.I01379 10.0kb upstream 10.0kb upstream 11122 true Chr09: 24197388-24208509 Eucalyptus grandis
Eucgr.I01379 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24197388-24207387 Eucalyptus grandis
Eucgr.I01379 10.0kb downstream 10.0kb downstream 11122 true Chr09: 24207388-24218509 Eucalyptus grandis
Eucgr.I01379 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24208510-24218509 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068960 5270 Rosid View MSA
123736646 5271 Pentapetalae View MSA
122769870 5272 Eudicot View MSA
122051385 5273 Angiosperm View MSA
121351135 5274 Embryophyte View MSA
123426003 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.7974 0.0 88.0377 High High
cufflinks 16.8028 0.0 38.0296   Low
cufflinks 37.9835 0.0 83.9987 High High
cufflinks 18.1459 0.0 40.8701    
cufflinks 19.9283 0.0 44.6182    
cufflinks 28.8502 0.0 63.8893    

0 Strain