Gene : Eucgr.I01295 E. grandis v2.0
Defline:  (1 of 1) PTHR24012:SF411 - EXPRESSED PROTEIN Genomic Order:  1037
Name:  ? Eucgr.I01295 Secondary Identifier:  ? PAC:32064174
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01295 0.5kb upstream 0.5kb upstream 8906 true Chr09: 23604429-23613334 Eucalyptus grandis
Eucgr.I01295 0.5kb upstream 0.5kb upstream 500 false Chr09: 23604429-23604928 Eucalyptus grandis
Eucgr.I01295 0.5kb downstream 0.5kb downstream 8906 true Chr09: 23604929-23613834 Eucalyptus grandis
Eucgr.I01295 0.5kb downstream 0.5kb downstream 500 false Chr09: 23613335-23613834 Eucalyptus grandis
Eucgr.I01295 1.0kb upstream 1.0kb upstream 9406 true Chr09: 23603929-23613334 Eucalyptus grandis
Eucgr.I01295 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23603929-23604928 Eucalyptus grandis
Eucgr.I01295 1.0kb downstream 1.0kb downstream 9406 true Chr09: 23604929-23614334 Eucalyptus grandis
Eucgr.I01295 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23613335-23614334 Eucalyptus grandis
Eucgr.I01295 2.0kb upstream 2.0kb upstream 10406 true Chr09: 23602929-23613334 Eucalyptus grandis
Eucgr.I01295 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23602929-23604928 Eucalyptus grandis
Eucgr.I01295 2.0kb downstream 2.0kb downstream 10406 true Chr09: 23604929-23615334 Eucalyptus grandis
Eucgr.I01295 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23613335-23615334 Eucalyptus grandis
Eucgr.I01295 5.0kb upstream 5.0kb upstream 13406 true Chr09: 23599929-23613334 Eucalyptus grandis
Eucgr.I01295 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23599929-23604928 Eucalyptus grandis
Eucgr.I01295 5.0kb downstream 5.0kb downstream 13406 true Chr09: 23604929-23618334 Eucalyptus grandis
Eucgr.I01295 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23613335-23618334 Eucalyptus grandis
Eucgr.I01295 10.0kb upstream 10.0kb upstream 18406 true Chr09: 23594929-23613334 Eucalyptus grandis
Eucgr.I01295 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23594929-23604928 Eucalyptus grandis
Eucgr.I01295 10.0kb downstream 10.0kb downstream 18406 true Chr09: 23604929-23623334 Eucalyptus grandis
Eucgr.I01295 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23613335-23623334 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062654 5270 Rosid View MSA
123744051 5271 Pentapetalae View MSA
122793233 5272 Eudicot View MSA
122049270 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349565 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0745 0.0 24.5049    
cufflinks 5.61732 0.0 12.6536   Low
cufflinks 10.401 0.0 23.0164    
cufflinks 9.15098 0.0 20.273    
cufflinks 9.95942 0.0 22.0559    
cufflinks 11.6728 0.0 25.8315    

0 Strain