Gene : Eucgr.I01261 E. grandis v2.0
Defline:  (1 of 1) PTHR12802:SF39 - SWI/SNF COMPLEX SUBUNIT SWI3D Genomic Order:  1005
Name:  ? Eucgr.I01261 Secondary Identifier:  ? PAC:32065598
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01261 0.5kb upstream 0.5kb upstream 7542 true Chr09: 23360592-23368133 Eucalyptus grandis
Eucgr.I01261 0.5kb upstream 0.5kb upstream 500 false Chr09: 23360592-23361091 Eucalyptus grandis
Eucgr.I01261 0.5kb downstream 0.5kb downstream 7542 true Chr09: 23361092-23368633 Eucalyptus grandis
Eucgr.I01261 0.5kb downstream 0.5kb downstream 500 false Chr09: 23368134-23368633 Eucalyptus grandis
Eucgr.I01261 1.0kb upstream 1.0kb upstream 8042 true Chr09: 23360092-23368133 Eucalyptus grandis
Eucgr.I01261 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23360092-23361091 Eucalyptus grandis
Eucgr.I01261 1.0kb downstream 1.0kb downstream 8042 true Chr09: 23361092-23369133 Eucalyptus grandis
Eucgr.I01261 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23368134-23369133 Eucalyptus grandis
Eucgr.I01261 2.0kb upstream 2.0kb upstream 9042 true Chr09: 23359092-23368133 Eucalyptus grandis
Eucgr.I01261 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23359092-23361091 Eucalyptus grandis
Eucgr.I01261 2.0kb downstream 2.0kb downstream 9042 true Chr09: 23361092-23370133 Eucalyptus grandis
Eucgr.I01261 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23368134-23370133 Eucalyptus grandis
Eucgr.I01261 5.0kb upstream 5.0kb upstream 12042 true Chr09: 23356092-23368133 Eucalyptus grandis
Eucgr.I01261 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23356092-23361091 Eucalyptus grandis
Eucgr.I01261 5.0kb downstream 5.0kb downstream 12042 true Chr09: 23361092-23373133 Eucalyptus grandis
Eucgr.I01261 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23368134-23373133 Eucalyptus grandis
Eucgr.I01261 10.0kb upstream 10.0kb upstream 17042 true Chr09: 23351092-23368133 Eucalyptus grandis
Eucgr.I01261 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23351092-23361091 Eucalyptus grandis
Eucgr.I01261 10.0kb downstream 10.0kb downstream 17042 true Chr09: 23361092-23378133 Eucalyptus grandis
Eucgr.I01261 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23368134-23378133 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063098 5270 Rosid View MSA
123749102 5271 Pentapetalae View MSA
122792303 5272 Eudicot View MSA
122043104 5273 Angiosperm View MSA
121349137 5274 Embryophyte View MSA
123428437 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.831 0.0 28.379   High
cufflinks 10.7719 0.0 23.8522    
cufflinks 11.4275 0.0 25.2915    
cufflinks 8.0647 0.0 17.9623    
cufflinks 7.42723 0.0 16.5982   Low
cufflinks 9.51808 0.0 21.147    

0 Strain