Gene : Eucgr.I01252 E. grandis v2.0
Defline:  (1 of 1) PTHR12300//PTHR12300:SF60 - HVA22-LIKE PROTEINS Genomic Order:  997
Name:  ? Eucgr.I01252 Secondary Identifier:  ? PAC:32062903
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01252 0.5kb upstream 0.5kb upstream 4590 true Chr09: 23305000-23309589 Eucalyptus grandis
Eucgr.I01252 0.5kb upstream 0.5kb upstream 500 false Chr09: 23309090-23309589 Eucalyptus grandis
Eucgr.I01252 0.5kb downstream 0.5kb downstream 4590 true Chr09: 23304500-23309089 Eucalyptus grandis
Eucgr.I01252 0.5kb downstream 0.5kb downstream 500 false Chr09: 23304500-23304999 Eucalyptus grandis
Eucgr.I01252 1.0kb upstream 1.0kb upstream 5090 true Chr09: 23305000-23310089 Eucalyptus grandis
Eucgr.I01252 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23309090-23310089 Eucalyptus grandis
Eucgr.I01252 1.0kb downstream 1.0kb downstream 5090 true Chr09: 23304000-23309089 Eucalyptus grandis
Eucgr.I01252 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23304000-23304999 Eucalyptus grandis
Eucgr.I01252 2.0kb upstream 2.0kb upstream 6090 true Chr09: 23305000-23311089 Eucalyptus grandis
Eucgr.I01252 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23309090-23311089 Eucalyptus grandis
Eucgr.I01252 2.0kb downstream 2.0kb downstream 6090 true Chr09: 23303000-23309089 Eucalyptus grandis
Eucgr.I01252 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23303000-23304999 Eucalyptus grandis
Eucgr.I01252 5.0kb upstream 5.0kb upstream 9090 true Chr09: 23305000-23314089 Eucalyptus grandis
Eucgr.I01252 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23309090-23314089 Eucalyptus grandis
Eucgr.I01252 5.0kb downstream 5.0kb downstream 9090 true Chr09: 23300000-23309089 Eucalyptus grandis
Eucgr.I01252 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23300000-23304999 Eucalyptus grandis
Eucgr.I01252 10.0kb upstream 10.0kb upstream 14090 true Chr09: 23305000-23319089 Eucalyptus grandis
Eucgr.I01252 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23309090-23319089 Eucalyptus grandis
Eucgr.I01252 10.0kb downstream 10.0kb downstream 14090 true Chr09: 23295000-23309089 Eucalyptus grandis
Eucgr.I01252 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23295000-23304999 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070048 5270 Rosid View MSA
123739293 5271 Pentapetalae View MSA
122793749 5272 Eudicot View MSA
122049785 5273 Angiosperm View MSA
121348295 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.0694 0.0 64.8796    
cufflinks 18.4824 0.0 42.5005    
cufflinks 19.8413 0.0 45.5643    
cufflinks 21.3716 0.0 50.4731    
cufflinks 27.5736 0.0 63.885   High
cufflinks 17.3607 0.0 53.7188   Low

0 Strain