Gene : Eucgr.I01989 E. grandis v2.0
Defline:  (1 of 1) PTHR13931 - UBIQUITINATION FACTOR E4 Genomic Order:  1678
Name:  ? Eucgr.I01989 Secondary Identifier:  ? PAC:32065485
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7511 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01989 0.5kb upstream 0.5kb upstream 7627 true Chr09: 29671941-29679567 Eucalyptus grandis
Eucgr.I01989 0.5kb upstream 0.5kb upstream 500 false Chr09: 29671941-29672440 Eucalyptus grandis
Eucgr.I01989 0.5kb downstream 0.5kb downstream 7627 true Chr09: 29672441-29680067 Eucalyptus grandis
Eucgr.I01989 0.5kb downstream 0.5kb downstream 500 false Chr09: 29679568-29680067 Eucalyptus grandis
Eucgr.I01989 1.0kb upstream 1.0kb upstream 8127 true Chr09: 29671441-29679567 Eucalyptus grandis
Eucgr.I01989 1.0kb upstream 1.0kb upstream 1000 false Chr09: 29671441-29672440 Eucalyptus grandis
Eucgr.I01989 1.0kb downstream 1.0kb downstream 8127 true Chr09: 29672441-29680567 Eucalyptus grandis
Eucgr.I01989 1.0kb downstream 1.0kb downstream 1000 false Chr09: 29679568-29680567 Eucalyptus grandis
Eucgr.I01989 2.0kb upstream 2.0kb upstream 9127 true Chr09: 29670441-29679567 Eucalyptus grandis
Eucgr.I01989 2.0kb upstream 2.0kb upstream 2000 false Chr09: 29670441-29672440 Eucalyptus grandis
Eucgr.I01989 2.0kb downstream 2.0kb downstream 9127 true Chr09: 29672441-29681567 Eucalyptus grandis
Eucgr.I01989 2.0kb downstream 2.0kb downstream 2000 false Chr09: 29679568-29681567 Eucalyptus grandis
Eucgr.I01989 5.0kb upstream 5.0kb upstream 12127 true Chr09: 29667441-29679567 Eucalyptus grandis
Eucgr.I01989 5.0kb upstream 5.0kb upstream 5000 false Chr09: 29667441-29672440 Eucalyptus grandis
Eucgr.I01989 5.0kb downstream 5.0kb downstream 12127 true Chr09: 29672441-29684567 Eucalyptus grandis
Eucgr.I01989 5.0kb downstream 5.0kb downstream 5000 false Chr09: 29679568-29684567 Eucalyptus grandis
Eucgr.I01989 10.0kb upstream 10.0kb upstream 17127 true Chr09: 29662441-29679567 Eucalyptus grandis
Eucgr.I01989 10.0kb upstream 10.0kb upstream 10000 false Chr09: 29662441-29672440 Eucalyptus grandis
Eucgr.I01989 10.0kb downstream 10.0kb downstream 17127 true Chr09: 29672441-29689567 Eucalyptus grandis
Eucgr.I01989 10.0kb downstream 10.0kb downstream 10000 false Chr09: 29679568-29689567 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063394 5270 Rosid View MSA
123741006 5271 Pentapetalae View MSA
122793160 5272 Eudicot View MSA
122042023 5273 Angiosperm View MSA
121344944 5274 Embryophyte View MSA
123426697 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.8505 0.0 72.405 High  
cufflinks 33.4172 0.0 80.0211    
cufflinks 34.2249 0.0 107.139 High  
cufflinks 34.6989 0.0 105.202    
cufflinks 24.4689 0.0 56.8879   Low
cufflinks 35.679 0.0 81.4558 High  

0 Strain