Gene : Eucgr.I01854 E. grandis v2.0
Defline:  (1 of 1) PTHR22773//PTHR22773:SF84 - NADH DEHYDROGENASE Genomic Order:  1563
Name:  ? Eucgr.I01854 Secondary Identifier:  ? PAC:32062991
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01854 0.5kb upstream 0.5kb upstream 1482 true Chr09: 28470703-28472184 Eucalyptus grandis
Eucgr.I01854 0.5kb upstream 0.5kb upstream 500 false Chr09: 28471685-28472184 Eucalyptus grandis
Eucgr.I01854 0.5kb downstream 0.5kb downstream 1482 true Chr09: 28470203-28471684 Eucalyptus grandis
Eucgr.I01854 0.5kb downstream 0.5kb downstream 500 false Chr09: 28470203-28470702 Eucalyptus grandis
Eucgr.I01854 1.0kb upstream 1.0kb upstream 1982 true Chr09: 28470703-28472684 Eucalyptus grandis
Eucgr.I01854 1.0kb upstream 1.0kb upstream 1000 false Chr09: 28471685-28472684 Eucalyptus grandis
Eucgr.I01854 1.0kb downstream 1.0kb downstream 1982 true Chr09: 28469703-28471684 Eucalyptus grandis
Eucgr.I01854 1.0kb downstream 1.0kb downstream 1000 false Chr09: 28469703-28470702 Eucalyptus grandis
Eucgr.I01854 2.0kb upstream 2.0kb upstream 2982 true Chr09: 28470703-28473684 Eucalyptus grandis
Eucgr.I01854 2.0kb upstream 2.0kb upstream 2000 false Chr09: 28471685-28473684 Eucalyptus grandis
Eucgr.I01854 2.0kb downstream 2.0kb downstream 2982 true Chr09: 28468703-28471684 Eucalyptus grandis
Eucgr.I01854 2.0kb downstream 2.0kb downstream 2000 false Chr09: 28468703-28470702 Eucalyptus grandis
Eucgr.I01854 5.0kb upstream 5.0kb upstream 5982 true Chr09: 28470703-28476684 Eucalyptus grandis
Eucgr.I01854 5.0kb upstream 5.0kb upstream 5000 false Chr09: 28471685-28476684 Eucalyptus grandis
Eucgr.I01854 5.0kb downstream 5.0kb downstream 5982 true Chr09: 28465703-28471684 Eucalyptus grandis
Eucgr.I01854 5.0kb downstream 5.0kb downstream 5000 false Chr09: 28465703-28470702 Eucalyptus grandis
Eucgr.I01854 10.0kb upstream 10.0kb upstream 10982 true Chr09: 28470703-28481684 Eucalyptus grandis
Eucgr.I01854 10.0kb upstream 10.0kb upstream 10000 false Chr09: 28471685-28481684 Eucalyptus grandis
Eucgr.I01854 10.0kb downstream 10.0kb downstream 10982 true Chr09: 28460703-28471684 Eucalyptus grandis
Eucgr.I01854 10.0kb downstream 10.0kb downstream 10000 false Chr09: 28460703-28470702 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050947 5270 Rosid View MSA
123751395 5271 Pentapetalae View MSA
122774002 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.24008 0.0 16.5196    
cufflinks 2.66125 0.0 7.53703   Low
cufflinks 6.16381 0.0 16.2215    
cufflinks 4.78457 0.0 12.8089    
cufflinks 9.34663 0.0 23.576    
cufflinks 9.71403 0.0 24.9388   High

0 Strain