Gene : Eucgr.I01832 E. grandis v2.0
Defline:  (1 of 1) PTHR32285:SF28 - PROTEIN ALTERED XYLOGLUCAN 4-LIKE Genomic Order:  1543
Name:  ? Eucgr.I01832 Secondary Identifier:  ? PAC:32064381
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01832 0.5kb upstream 0.5kb upstream 3233 true Chr09: 28212387-28215619 Eucalyptus grandis
Eucgr.I01832 0.5kb upstream 0.5kb upstream 500 false Chr09: 28215120-28215619 Eucalyptus grandis
Eucgr.I01832 0.5kb downstream 0.5kb downstream 3233 true Chr09: 28211887-28215119 Eucalyptus grandis
Eucgr.I01832 0.5kb downstream 0.5kb downstream 500 false Chr09: 28211887-28212386 Eucalyptus grandis
Eucgr.I01832 1.0kb upstream 1.0kb upstream 3733 true Chr09: 28212387-28216119 Eucalyptus grandis
Eucgr.I01832 1.0kb upstream 1.0kb upstream 1000 false Chr09: 28215120-28216119 Eucalyptus grandis
Eucgr.I01832 1.0kb downstream 1.0kb downstream 3733 true Chr09: 28211387-28215119 Eucalyptus grandis
Eucgr.I01832 1.0kb downstream 1.0kb downstream 1000 false Chr09: 28211387-28212386 Eucalyptus grandis
Eucgr.I01832 2.0kb upstream 2.0kb upstream 4733 true Chr09: 28212387-28217119 Eucalyptus grandis
Eucgr.I01832 2.0kb upstream 2.0kb upstream 2000 false Chr09: 28215120-28217119 Eucalyptus grandis
Eucgr.I01832 2.0kb downstream 2.0kb downstream 4733 true Chr09: 28210387-28215119 Eucalyptus grandis
Eucgr.I01832 2.0kb downstream 2.0kb downstream 2000 false Chr09: 28210387-28212386 Eucalyptus grandis
Eucgr.I01832 5.0kb upstream 5.0kb upstream 7733 true Chr09: 28212387-28220119 Eucalyptus grandis
Eucgr.I01832 5.0kb upstream 5.0kb upstream 5000 false Chr09: 28215120-28220119 Eucalyptus grandis
Eucgr.I01832 5.0kb downstream 5.0kb downstream 7733 true Chr09: 28207387-28215119 Eucalyptus grandis
Eucgr.I01832 5.0kb downstream 5.0kb downstream 5000 false Chr09: 28207387-28212386 Eucalyptus grandis
Eucgr.I01832 10.0kb upstream 10.0kb upstream 12733 true Chr09: 28212387-28225119 Eucalyptus grandis
Eucgr.I01832 10.0kb upstream 10.0kb upstream 10000 false Chr09: 28215120-28225119 Eucalyptus grandis
Eucgr.I01832 10.0kb downstream 10.0kb downstream 12733 true Chr09: 28202387-28215119 Eucalyptus grandis
Eucgr.I01832 10.0kb downstream 10.0kb downstream 10000 false Chr09: 28202387-28212386 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066209 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.48255 0.0 16.2606   Low
cufflinks 42.1154 0.0 93.2969    
cufflinks 9.93929 0.0 24.0831    
cufflinks 36.6558 0.0 81.4397    
cufflinks 48.8177 0.0 107.974 High High
cufflinks 12.2632 0.0 28.7745    

0 Strain