Gene : Eucgr.I01790 E. grandis v2.0
Defline:  (1 of 1) PTHR11002:SF7 - CARBONIC ANHYDRASE 2, CHLOROPLASTIC-RELATED Genomic Order:  1510
Name:  ? Eucgr.I01790 Secondary Identifier:  ? PAC:32065194
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CYANCAT-PWY Eucalyptus grandis pathologic  
Egrandis PWY-241 Eucalyptus grandis pathologic  
Egrandis PWY-7115 Eucalyptus grandis pathologic  
Egrandis PWY-7117 Eucalyptus grandis pathologic  
Egrandis PWYQT-4429 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01790 0.5kb upstream 0.5kb upstream 5022 true Chr09: 27890687-27895708 Eucalyptus grandis
Eucgr.I01790 0.5kb upstream 0.5kb upstream 500 false Chr09: 27890687-27891186 Eucalyptus grandis
Eucgr.I01790 0.5kb downstream 0.5kb downstream 5022 true Chr09: 27891187-27896208 Eucalyptus grandis
Eucgr.I01790 0.5kb downstream 0.5kb downstream 500 false Chr09: 27895709-27896208 Eucalyptus grandis
Eucgr.I01790 1.0kb upstream 1.0kb upstream 5522 true Chr09: 27890187-27895708 Eucalyptus grandis
Eucgr.I01790 1.0kb upstream 1.0kb upstream 1000 false Chr09: 27890187-27891186 Eucalyptus grandis
Eucgr.I01790 1.0kb downstream 1.0kb downstream 5522 true Chr09: 27891187-27896708 Eucalyptus grandis
Eucgr.I01790 1.0kb downstream 1.0kb downstream 1000 false Chr09: 27895709-27896708 Eucalyptus grandis
Eucgr.I01790 2.0kb upstream 2.0kb upstream 6522 true Chr09: 27889187-27895708 Eucalyptus grandis
Eucgr.I01790 2.0kb upstream 2.0kb upstream 2000 false Chr09: 27889187-27891186 Eucalyptus grandis
Eucgr.I01790 2.0kb downstream 2.0kb downstream 6522 true Chr09: 27891187-27897708 Eucalyptus grandis
Eucgr.I01790 2.0kb downstream 2.0kb downstream 2000 false Chr09: 27895709-27897708 Eucalyptus grandis
Eucgr.I01790 5.0kb upstream 5.0kb upstream 9522 true Chr09: 27886187-27895708 Eucalyptus grandis
Eucgr.I01790 5.0kb upstream 5.0kb upstream 5000 false Chr09: 27886187-27891186 Eucalyptus grandis
Eucgr.I01790 5.0kb downstream 5.0kb downstream 9522 true Chr09: 27891187-27900708 Eucalyptus grandis
Eucgr.I01790 5.0kb downstream 5.0kb downstream 5000 false Chr09: 27895709-27900708 Eucalyptus grandis
Eucgr.I01790 10.0kb upstream 10.0kb upstream 14522 true Chr09: 27881187-27895708 Eucalyptus grandis
Eucgr.I01790 10.0kb upstream 10.0kb upstream 10000 false Chr09: 27881187-27891186 Eucalyptus grandis
Eucgr.I01790 10.0kb downstream 10.0kb downstream 14522 true Chr09: 27891187-27905708 Eucalyptus grandis
Eucgr.I01790 10.0kb downstream 10.0kb downstream 10000 false Chr09: 27895709-27905708 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067847 5270 Rosid View MSA
123748034 5271 Pentapetalae View MSA
122785685 5272 Eudicot View MSA
122044024 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 73.1564 0.0 163.388 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 96.5228 0.0 218.06 High  
cufflinks 1.66745 0.0 4.70868   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 857.361 0.0 2515.01 High High

0 Strain