Gene : Eucgr.I01792 E. grandis v2.0
Defline:  (1 of 1) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC Genomic Order:  1512
Name:  ? Eucgr.I01792 Secondary Identifier:  ? PAC:32065635
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01792 0.5kb upstream 0.5kb upstream 4532 true Chr09: 27899577-27904108 Eucalyptus grandis
Eucgr.I01792 0.5kb upstream 0.5kb upstream 500 false Chr09: 27903609-27904108 Eucalyptus grandis
Eucgr.I01792 0.5kb downstream 0.5kb downstream 4532 true Chr09: 27899077-27903608 Eucalyptus grandis
Eucgr.I01792 0.5kb downstream 0.5kb downstream 500 false Chr09: 27899077-27899576 Eucalyptus grandis
Eucgr.I01792 1.0kb upstream 1.0kb upstream 5032 true Chr09: 27899577-27904608 Eucalyptus grandis
Eucgr.I01792 1.0kb upstream 1.0kb upstream 1000 false Chr09: 27903609-27904608 Eucalyptus grandis
Eucgr.I01792 1.0kb downstream 1.0kb downstream 5032 true Chr09: 27898577-27903608 Eucalyptus grandis
Eucgr.I01792 1.0kb downstream 1.0kb downstream 1000 false Chr09: 27898577-27899576 Eucalyptus grandis
Eucgr.I01792 2.0kb upstream 2.0kb upstream 6032 true Chr09: 27899577-27905608 Eucalyptus grandis
Eucgr.I01792 2.0kb upstream 2.0kb upstream 2000 false Chr09: 27903609-27905608 Eucalyptus grandis
Eucgr.I01792 2.0kb downstream 2.0kb downstream 6032 true Chr09: 27897577-27903608 Eucalyptus grandis
Eucgr.I01792 2.0kb downstream 2.0kb downstream 2000 false Chr09: 27897577-27899576 Eucalyptus grandis
Eucgr.I01792 5.0kb upstream 5.0kb upstream 9032 true Chr09: 27899577-27908608 Eucalyptus grandis
Eucgr.I01792 5.0kb upstream 5.0kb upstream 5000 false Chr09: 27903609-27908608 Eucalyptus grandis
Eucgr.I01792 5.0kb downstream 5.0kb downstream 9032 true Chr09: 27894577-27903608 Eucalyptus grandis
Eucgr.I01792 5.0kb downstream 5.0kb downstream 5000 false Chr09: 27894577-27899576 Eucalyptus grandis
Eucgr.I01792 10.0kb upstream 10.0kb upstream 14032 true Chr09: 27899577-27913608 Eucalyptus grandis
Eucgr.I01792 10.0kb upstream 10.0kb upstream 10000 false Chr09: 27903609-27913608 Eucalyptus grandis
Eucgr.I01792 10.0kb downstream 10.0kb downstream 14032 true Chr09: 27889577-27903608 Eucalyptus grandis
Eucgr.I01792 10.0kb downstream 10.0kb downstream 10000 false Chr09: 27889577-27899576 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067887 5270 Rosid View MSA
123737720 5271 Pentapetalae View MSA
122794444 5272 Eudicot View MSA
122046956 5273 Angiosperm View MSA
121350502 5274 Embryophyte View MSA
123427247 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6666 0.0 29.1081    
cufflinks 25.1786 0.0 55.9027   High
cufflinks 10.3559 0.0 24.1977    
cufflinks 6.36083 0.0 15.525   Low
cufflinks 11.8975 0.0 27.4595    
cufflinks 21.7626 0.0 48.5885    

0 Strain