Gene : Eucgr.I01796 E. grandis v2.0
Defline:  (1 of 4) PTHR22835//PTHR22835:SF250 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  1515
Name:  ? Eucgr.I01796 Secondary Identifier:  ? PAC:32064972
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01796 0.5kb upstream 0.5kb upstream 2959 true Chr09: 27925827-27928785 Eucalyptus grandis
Eucgr.I01796 0.5kb upstream 0.5kb upstream 500 false Chr09: 27925827-27926326 Eucalyptus grandis
Eucgr.I01796 0.5kb downstream 0.5kb downstream 2959 true Chr09: 27926327-27929285 Eucalyptus grandis
Eucgr.I01796 0.5kb downstream 0.5kb downstream 500 false Chr09: 27928786-27929285 Eucalyptus grandis
Eucgr.I01796 1.0kb upstream 1.0kb upstream 3459 true Chr09: 27925327-27928785 Eucalyptus grandis
Eucgr.I01796 1.0kb upstream 1.0kb upstream 1000 false Chr09: 27925327-27926326 Eucalyptus grandis
Eucgr.I01796 1.0kb downstream 1.0kb downstream 3459 true Chr09: 27926327-27929785 Eucalyptus grandis
Eucgr.I01796 1.0kb downstream 1.0kb downstream 1000 false Chr09: 27928786-27929785 Eucalyptus grandis
Eucgr.I01796 2.0kb upstream 2.0kb upstream 4459 true Chr09: 27924327-27928785 Eucalyptus grandis
Eucgr.I01796 2.0kb upstream 2.0kb upstream 2000 false Chr09: 27924327-27926326 Eucalyptus grandis
Eucgr.I01796 2.0kb downstream 2.0kb downstream 4459 true Chr09: 27926327-27930785 Eucalyptus grandis
Eucgr.I01796 2.0kb downstream 2.0kb downstream 2000 false Chr09: 27928786-27930785 Eucalyptus grandis
Eucgr.I01796 5.0kb upstream 5.0kb upstream 7459 true Chr09: 27921327-27928785 Eucalyptus grandis
Eucgr.I01796 5.0kb upstream 5.0kb upstream 5000 false Chr09: 27921327-27926326 Eucalyptus grandis
Eucgr.I01796 5.0kb downstream 5.0kb downstream 7459 true Chr09: 27926327-27933785 Eucalyptus grandis
Eucgr.I01796 5.0kb downstream 5.0kb downstream 5000 false Chr09: 27928786-27933785 Eucalyptus grandis
Eucgr.I01796 10.0kb upstream 10.0kb upstream 12459 true Chr09: 27916327-27928785 Eucalyptus grandis
Eucgr.I01796 10.0kb upstream 10.0kb upstream 10000 false Chr09: 27916327-27926326 Eucalyptus grandis
Eucgr.I01796 10.0kb downstream 10.0kb downstream 12459 true Chr09: 27926327-27938785 Eucalyptus grandis
Eucgr.I01796 10.0kb downstream 10.0kb downstream 10000 false Chr09: 27928786-27938785 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074117 5270 Rosid View MSA
123751709 5271 Pentapetalae View MSA
122792759 5272 Eudicot View MSA
122045823 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.63782 0.0 7.44973    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.28397 0.0 8.58117    
cufflinks 0.153057 0.0 0.853502 Low Low
cufflinks 1.67707 0.0 5.16691    
cufflinks 2.02761 0.0 5.90263    

0 Strain