Gene : Eucgr.I01750 E. grandis v2.0
Defline:  (1 of 2) PTHR31301:SF12 - LOB DOMAIN-CONTAINING PROTEIN 25 Genomic Order:  1478
Name:  ? Eucgr.I01750 Secondary Identifier:  ? PAC:32064974
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01750 0.5kb upstream 0.5kb upstream 2159 true Chr09: 27444235-27446393 Eucalyptus grandis
Eucgr.I01750 0.5kb upstream 0.5kb upstream 500 false Chr09: 27444235-27444734 Eucalyptus grandis
Eucgr.I01750 0.5kb downstream 0.5kb downstream 2159 true Chr09: 27444735-27446893 Eucalyptus grandis
Eucgr.I01750 0.5kb downstream 0.5kb downstream 500 false Chr09: 27446394-27446893 Eucalyptus grandis
Eucgr.I01750 1.0kb upstream 1.0kb upstream 2659 true Chr09: 27443735-27446393 Eucalyptus grandis
Eucgr.I01750 1.0kb upstream 1.0kb upstream 1000 false Chr09: 27443735-27444734 Eucalyptus grandis
Eucgr.I01750 1.0kb downstream 1.0kb downstream 2659 true Chr09: 27444735-27447393 Eucalyptus grandis
Eucgr.I01750 1.0kb downstream 1.0kb downstream 1000 false Chr09: 27446394-27447393 Eucalyptus grandis
Eucgr.I01750 2.0kb upstream 2.0kb upstream 3659 true Chr09: 27442735-27446393 Eucalyptus grandis
Eucgr.I01750 2.0kb upstream 2.0kb upstream 2000 false Chr09: 27442735-27444734 Eucalyptus grandis
Eucgr.I01750 2.0kb downstream 2.0kb downstream 3659 true Chr09: 27444735-27448393 Eucalyptus grandis
Eucgr.I01750 2.0kb downstream 2.0kb downstream 2000 false Chr09: 27446394-27448393 Eucalyptus grandis
Eucgr.I01750 5.0kb upstream 5.0kb upstream 6659 true Chr09: 27439735-27446393 Eucalyptus grandis
Eucgr.I01750 5.0kb upstream 5.0kb upstream 5000 false Chr09: 27439735-27444734 Eucalyptus grandis
Eucgr.I01750 5.0kb downstream 5.0kb downstream 6659 true Chr09: 27444735-27451393 Eucalyptus grandis
Eucgr.I01750 5.0kb downstream 5.0kb downstream 5000 false Chr09: 27446394-27451393 Eucalyptus grandis
Eucgr.I01750 10.0kb upstream 10.0kb upstream 11659 true Chr09: 27434735-27446393 Eucalyptus grandis
Eucgr.I01750 10.0kb upstream 10.0kb upstream 10000 false Chr09: 27434735-27444734 Eucalyptus grandis
Eucgr.I01750 10.0kb downstream 10.0kb downstream 11659 true Chr09: 27444735-27456393 Eucalyptus grandis
Eucgr.I01750 10.0kb downstream 10.0kb downstream 10000 false Chr09: 27446394-27456393 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070294 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.15326 0.0 8.61867    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.86853 0.0 10.4107    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.491949 0.0 1.66543 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain