Gene : Eucgr.I01751 E. grandis v2.0
Defline:  (1 of 1) PTHR16212:SF4 - FOCADHESIN Genomic Order:  1479
Name:  ? Eucgr.I01751 Secondary Identifier:  ? PAC:32064477
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01751 0.5kb upstream 0.5kb upstream 15833 true Chr09: 27454246-27470078 Eucalyptus grandis
Eucgr.I01751 0.5kb upstream 0.5kb upstream 500 false Chr09: 27454246-27454745 Eucalyptus grandis
Eucgr.I01751 0.5kb downstream 0.5kb downstream 15833 true Chr09: 27454746-27470578 Eucalyptus grandis
Eucgr.I01751 0.5kb downstream 0.5kb downstream 500 false Chr09: 27470079-27470578 Eucalyptus grandis
Eucgr.I01751 1.0kb upstream 1.0kb upstream 16333 true Chr09: 27453746-27470078 Eucalyptus grandis
Eucgr.I01751 1.0kb upstream 1.0kb upstream 1000 false Chr09: 27453746-27454745 Eucalyptus grandis
Eucgr.I01751 1.0kb downstream 1.0kb downstream 16333 true Chr09: 27454746-27471078 Eucalyptus grandis
Eucgr.I01751 1.0kb downstream 1.0kb downstream 1000 false Chr09: 27470079-27471078 Eucalyptus grandis
Eucgr.I01751 2.0kb upstream 2.0kb upstream 17333 true Chr09: 27452746-27470078 Eucalyptus grandis
Eucgr.I01751 2.0kb upstream 2.0kb upstream 2000 false Chr09: 27452746-27454745 Eucalyptus grandis
Eucgr.I01751 2.0kb downstream 2.0kb downstream 17333 true Chr09: 27454746-27472078 Eucalyptus grandis
Eucgr.I01751 2.0kb downstream 2.0kb downstream 2000 false Chr09: 27470079-27472078 Eucalyptus grandis
Eucgr.I01751 5.0kb upstream 5.0kb upstream 20333 true Chr09: 27449746-27470078 Eucalyptus grandis
Eucgr.I01751 5.0kb upstream 5.0kb upstream 5000 false Chr09: 27449746-27454745 Eucalyptus grandis
Eucgr.I01751 5.0kb downstream 5.0kb downstream 20333 true Chr09: 27454746-27475078 Eucalyptus grandis
Eucgr.I01751 5.0kb downstream 5.0kb downstream 5000 false Chr09: 27470079-27475078 Eucalyptus grandis
Eucgr.I01751 10.0kb upstream 10.0kb upstream 25333 true Chr09: 27444746-27470078 Eucalyptus grandis
Eucgr.I01751 10.0kb upstream 10.0kb upstream 10000 false Chr09: 27444746-27454745 Eucalyptus grandis
Eucgr.I01751 10.0kb downstream 10.0kb downstream 25333 true Chr09: 27454746-27480078 Eucalyptus grandis
Eucgr.I01751 10.0kb downstream 10.0kb downstream 10000 false Chr09: 27470079-27480078 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073528 5270 Rosid View MSA
123737254 5271 Pentapetalae View MSA
122792826 5272 Eudicot View MSA
122044820 5273 Angiosperm View MSA
121344294 5274 Embryophyte View MSA
123424915 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.57753 0.0 16.8007   High
cufflinks 5.09437 0.0 11.3865    
cufflinks 7.9354 0.0 17.569   High
cufflinks 4.37796 0.0 9.84805   Low
cufflinks 5.69313 0.0 12.7023    
cufflinks 5.7799 0.0 12.9383    

0 Strain