Gene : Eucgr.I01726 E. grandis v2.0
Defline:  (1 of 1) PTHR32175:SF2 - SURFEIT LOCUS PROTEIN 2 Genomic Order:  1455
Name:  ? Eucgr.I01726 Secondary Identifier:  ? PAC:32065403
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01726 0.5kb upstream 0.5kb upstream 2847 true Chr09: 27273422-27276268 Eucalyptus grandis
Eucgr.I01726 0.5kb upstream 0.5kb upstream 500 false Chr09: 27275769-27276268 Eucalyptus grandis
Eucgr.I01726 0.5kb downstream 0.5kb downstream 2847 true Chr09: 27272922-27275768 Eucalyptus grandis
Eucgr.I01726 0.5kb downstream 0.5kb downstream 500 false Chr09: 27272922-27273421 Eucalyptus grandis
Eucgr.I01726 1.0kb upstream 1.0kb upstream 3347 true Chr09: 27273422-27276768 Eucalyptus grandis
Eucgr.I01726 1.0kb upstream 1.0kb upstream 1000 false Chr09: 27275769-27276768 Eucalyptus grandis
Eucgr.I01726 1.0kb downstream 1.0kb downstream 3347 true Chr09: 27272422-27275768 Eucalyptus grandis
Eucgr.I01726 1.0kb downstream 1.0kb downstream 1000 false Chr09: 27272422-27273421 Eucalyptus grandis
Eucgr.I01726 2.0kb upstream 2.0kb upstream 4347 true Chr09: 27273422-27277768 Eucalyptus grandis
Eucgr.I01726 2.0kb upstream 2.0kb upstream 2000 false Chr09: 27275769-27277768 Eucalyptus grandis
Eucgr.I01726 2.0kb downstream 2.0kb downstream 4347 true Chr09: 27271422-27275768 Eucalyptus grandis
Eucgr.I01726 2.0kb downstream 2.0kb downstream 2000 false Chr09: 27271422-27273421 Eucalyptus grandis
Eucgr.I01726 5.0kb upstream 5.0kb upstream 7347 true Chr09: 27273422-27280768 Eucalyptus grandis
Eucgr.I01726 5.0kb upstream 5.0kb upstream 5000 false Chr09: 27275769-27280768 Eucalyptus grandis
Eucgr.I01726 5.0kb downstream 5.0kb downstream 7347 true Chr09: 27268422-27275768 Eucalyptus grandis
Eucgr.I01726 5.0kb downstream 5.0kb downstream 5000 false Chr09: 27268422-27273421 Eucalyptus grandis
Eucgr.I01726 10.0kb upstream 10.0kb upstream 12347 true Chr09: 27273422-27285768 Eucalyptus grandis
Eucgr.I01726 10.0kb upstream 10.0kb upstream 10000 false Chr09: 27275769-27285768 Eucalyptus grandis
Eucgr.I01726 10.0kb downstream 10.0kb downstream 12347 true Chr09: 27263422-27275768 Eucalyptus grandis
Eucgr.I01726 10.0kb downstream 10.0kb downstream 10000 false Chr09: 27263422-27273421 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062498 5270 Rosid View MSA
123741636 5271 Pentapetalae View MSA
122789257 5272 Eudicot View MSA
122045153 5273 Angiosperm View MSA
121344193 5274 Embryophyte View MSA
123425861 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.95988 0.0 16.8143    
cufflinks 2.89378 0.0 7.64646   Low
cufflinks 4.40558 0.0 11.1285    
cufflinks 3.68027 0.0 9.45343    
cufflinks 9.45884 0.0 22.2216    
cufflinks 10.2326 0.0 23.91   High

0 Strain