Gene : Eucgr.I01702 E. grandis v2.0
Defline:  (1 of 2) PTHR12506:SF20 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 43 Genomic Order:  1431
Name:  ? Eucgr.I01702 Secondary Identifier:  ? PAC:32064803
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01702 0.5kb upstream 0.5kb upstream 3551 true Chr09: 27085071-27088621 Eucalyptus grandis
Eucgr.I01702 0.5kb upstream 0.5kb upstream 500 false Chr09: 27088122-27088621 Eucalyptus grandis
Eucgr.I01702 0.5kb downstream 0.5kb downstream 3551 true Chr09: 27084571-27088121 Eucalyptus grandis
Eucgr.I01702 0.5kb downstream 0.5kb downstream 500 false Chr09: 27084571-27085070 Eucalyptus grandis
Eucgr.I01702 1.0kb upstream 1.0kb upstream 4051 true Chr09: 27085071-27089121 Eucalyptus grandis
Eucgr.I01702 1.0kb upstream 1.0kb upstream 1000 false Chr09: 27088122-27089121 Eucalyptus grandis
Eucgr.I01702 1.0kb downstream 1.0kb downstream 4051 true Chr09: 27084071-27088121 Eucalyptus grandis
Eucgr.I01702 1.0kb downstream 1.0kb downstream 1000 false Chr09: 27084071-27085070 Eucalyptus grandis
Eucgr.I01702 2.0kb upstream 2.0kb upstream 5051 true Chr09: 27085071-27090121 Eucalyptus grandis
Eucgr.I01702 2.0kb upstream 2.0kb upstream 2000 false Chr09: 27088122-27090121 Eucalyptus grandis
Eucgr.I01702 2.0kb downstream 2.0kb downstream 5051 true Chr09: 27083071-27088121 Eucalyptus grandis
Eucgr.I01702 2.0kb downstream 2.0kb downstream 2000 false Chr09: 27083071-27085070 Eucalyptus grandis
Eucgr.I01702 5.0kb upstream 5.0kb upstream 8051 true Chr09: 27085071-27093121 Eucalyptus grandis
Eucgr.I01702 5.0kb upstream 5.0kb upstream 5000 false Chr09: 27088122-27093121 Eucalyptus grandis
Eucgr.I01702 5.0kb downstream 5.0kb downstream 8051 true Chr09: 27080071-27088121 Eucalyptus grandis
Eucgr.I01702 5.0kb downstream 5.0kb downstream 5000 false Chr09: 27080071-27085070 Eucalyptus grandis
Eucgr.I01702 10.0kb upstream 10.0kb upstream 13051 true Chr09: 27085071-27098121 Eucalyptus grandis
Eucgr.I01702 10.0kb upstream 10.0kb upstream 10000 false Chr09: 27088122-27098121 Eucalyptus grandis
Eucgr.I01702 10.0kb downstream 10.0kb downstream 13051 true Chr09: 27075071-27088121 Eucalyptus grandis
Eucgr.I01702 10.0kb downstream 10.0kb downstream 10000 false Chr09: 27075071-27085070 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063144 5270 Rosid View MSA
123743724 5271 Pentapetalae View MSA
122789792 5272 Eudicot View MSA
122050864 5273 Angiosperm View MSA
121352088 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.79142 0.0 7.24811    
cufflinks 1.15266 0.0 3.2645   Low
cufflinks 2.75186 0.0 7.15853    
cufflinks 2.58117 0.0 6.73994    
cufflinks 3.46987 0.0 8.81883   High
cufflinks 1.16952 0.0 3.30947   Low

0 Strain