Gene : Eucgr.I01643 E. grandis v2.0
Defline:  (1 of 3) PTHR15893 - RIBOSOMAL PROTEIN L27 Genomic Order:  1365
Name:  ? Eucgr.I01643 Secondary Identifier:  ? PAC:32063620
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01643 0.5kb upstream 0.5kb upstream 3024 true Chr09: 26301565-26304588 Eucalyptus grandis
Eucgr.I01643 0.5kb upstream 0.5kb upstream 500 false Chr09: 26304089-26304588 Eucalyptus grandis
Eucgr.I01643 0.5kb downstream 0.5kb downstream 3024 true Chr09: 26301065-26304088 Eucalyptus grandis
Eucgr.I01643 0.5kb downstream 0.5kb downstream 500 false Chr09: 26301065-26301564 Eucalyptus grandis
Eucgr.I01643 1.0kb upstream 1.0kb upstream 3524 true Chr09: 26301565-26305088 Eucalyptus grandis
Eucgr.I01643 1.0kb upstream 1.0kb upstream 1000 false Chr09: 26304089-26305088 Eucalyptus grandis
Eucgr.I01643 1.0kb downstream 1.0kb downstream 3524 true Chr09: 26300565-26304088 Eucalyptus grandis
Eucgr.I01643 1.0kb downstream 1.0kb downstream 1000 false Chr09: 26300565-26301564 Eucalyptus grandis
Eucgr.I01643 2.0kb upstream 2.0kb upstream 4524 true Chr09: 26301565-26306088 Eucalyptus grandis
Eucgr.I01643 2.0kb upstream 2.0kb upstream 2000 false Chr09: 26304089-26306088 Eucalyptus grandis
Eucgr.I01643 2.0kb downstream 2.0kb downstream 4524 true Chr09: 26299565-26304088 Eucalyptus grandis
Eucgr.I01643 2.0kb downstream 2.0kb downstream 2000 false Chr09: 26299565-26301564 Eucalyptus grandis
Eucgr.I01643 5.0kb upstream 5.0kb upstream 7524 true Chr09: 26301565-26309088 Eucalyptus grandis
Eucgr.I01643 5.0kb upstream 5.0kb upstream 5000 false Chr09: 26304089-26309088 Eucalyptus grandis
Eucgr.I01643 5.0kb downstream 5.0kb downstream 7524 true Chr09: 26296565-26304088 Eucalyptus grandis
Eucgr.I01643 5.0kb downstream 5.0kb downstream 5000 false Chr09: 26296565-26301564 Eucalyptus grandis
Eucgr.I01643 10.0kb upstream 10.0kb upstream 12524 true Chr09: 26301565-26314088 Eucalyptus grandis
Eucgr.I01643 10.0kb upstream 10.0kb upstream 10000 false Chr09: 26304089-26314088 Eucalyptus grandis
Eucgr.I01643 10.0kb downstream 10.0kb downstream 12524 true Chr09: 26291565-26304088 Eucalyptus grandis
Eucgr.I01643 10.0kb downstream 10.0kb downstream 10000 false Chr09: 26291565-26301564 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063314 5270 Rosid View MSA
123738947 5271 Pentapetalae View MSA
122793743 5272 Eudicot View MSA
122042645 5273 Angiosperm View MSA
123429095 5275 Viridiplantae View MSA
121344050 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4884 0.0 34.4322    
cufflinks 36.7347 0.0 81.8393 High  
cufflinks 5.05075 0.0 13.346    
cufflinks 2.90455 0.0 8.12166   Low
cufflinks 5.61392 0.0 14.6451    
cufflinks 68.6686 0.0 152.05 High High

0 Strain