Gene : Eucgr.I01653 E. grandis v2.0
Defline:  (1 of 4) PTHR21109 - MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 Genomic Order:  1375
Name:  ? Eucgr.I01653 Secondary Identifier:  ? PAC:32064621
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01653 0.5kb upstream 0.5kb upstream 2177 true Chr09: 26355303-26357479 Eucalyptus grandis
Eucgr.I01653 0.5kb upstream 0.5kb upstream 500 false Chr09: 26355303-26355802 Eucalyptus grandis
Eucgr.I01653 0.5kb downstream 0.5kb downstream 2177 true Chr09: 26355803-26357979 Eucalyptus grandis
Eucgr.I01653 0.5kb downstream 0.5kb downstream 500 false Chr09: 26357480-26357979 Eucalyptus grandis
Eucgr.I01653 1.0kb upstream 1.0kb upstream 2677 true Chr09: 26354803-26357479 Eucalyptus grandis
Eucgr.I01653 1.0kb upstream 1.0kb upstream 1000 false Chr09: 26354803-26355802 Eucalyptus grandis
Eucgr.I01653 1.0kb downstream 1.0kb downstream 2677 true Chr09: 26355803-26358479 Eucalyptus grandis
Eucgr.I01653 1.0kb downstream 1.0kb downstream 1000 false Chr09: 26357480-26358479 Eucalyptus grandis
Eucgr.I01653 2.0kb upstream 2.0kb upstream 3677 true Chr09: 26353803-26357479 Eucalyptus grandis
Eucgr.I01653 2.0kb upstream 2.0kb upstream 2000 false Chr09: 26353803-26355802 Eucalyptus grandis
Eucgr.I01653 2.0kb downstream 2.0kb downstream 3677 true Chr09: 26355803-26359479 Eucalyptus grandis
Eucgr.I01653 2.0kb downstream 2.0kb downstream 2000 false Chr09: 26357480-26359479 Eucalyptus grandis
Eucgr.I01653 5.0kb upstream 5.0kb upstream 6677 true Chr09: 26350803-26357479 Eucalyptus grandis
Eucgr.I01653 5.0kb upstream 5.0kb upstream 5000 false Chr09: 26350803-26355802 Eucalyptus grandis
Eucgr.I01653 5.0kb downstream 5.0kb downstream 6677 true Chr09: 26355803-26362479 Eucalyptus grandis
Eucgr.I01653 5.0kb downstream 5.0kb downstream 5000 false Chr09: 26357480-26362479 Eucalyptus grandis
Eucgr.I01653 10.0kb upstream 10.0kb upstream 11677 true Chr09: 26345803-26357479 Eucalyptus grandis
Eucgr.I01653 10.0kb upstream 10.0kb upstream 10000 false Chr09: 26345803-26355802 Eucalyptus grandis
Eucgr.I01653 10.0kb downstream 10.0kb downstream 11677 true Chr09: 26355803-26367479 Eucalyptus grandis
Eucgr.I01653 10.0kb downstream 10.0kb downstream 10000 false Chr09: 26357480-26367479 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027800 5273 Angiosperm View MSA
124065865 5270 Rosid View MSA
123745699 5271 Pentapetalae View MSA
122793832 5272 Eudicot View MSA
121349916 5274 Embryophyte View MSA
123426860 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.2422 0.0 36.9884   Low
cufflinks 37.4969 0.0 84.8661    
cufflinks 16.836 0.0 40.7052    
cufflinks 18.4727 0.0 44.339    
cufflinks 42.0066 0.0 94.5807 High  
cufflinks 41.1013 0.0 92.0981 High  

0 Strain