Gene : Eucgr.I02427 E. grandis v2.0
Defline:  (1 of 2) PTHR16517:SF41 - TUBBY-LIKE F-BOX PROTEIN 6 Genomic Order:  2056
Name:  ? Eucgr.I02427 Secondary Identifier:  ? PAC:32064837
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02427 0.5kb upstream 0.5kb upstream 4320 true Chr09: 34737912-34742231 Eucalyptus grandis
Eucgr.I02427 0.5kb upstream 0.5kb upstream 500 false Chr09: 34737912-34738411 Eucalyptus grandis
Eucgr.I02427 0.5kb downstream 0.5kb downstream 4320 true Chr09: 34738412-34742731 Eucalyptus grandis
Eucgr.I02427 0.5kb downstream 0.5kb downstream 500 false Chr09: 34742232-34742731 Eucalyptus grandis
Eucgr.I02427 1.0kb upstream 1.0kb upstream 4820 true Chr09: 34737412-34742231 Eucalyptus grandis
Eucgr.I02427 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34737412-34738411 Eucalyptus grandis
Eucgr.I02427 1.0kb downstream 1.0kb downstream 4820 true Chr09: 34738412-34743231 Eucalyptus grandis
Eucgr.I02427 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34742232-34743231 Eucalyptus grandis
Eucgr.I02427 2.0kb upstream 2.0kb upstream 5820 true Chr09: 34736412-34742231 Eucalyptus grandis
Eucgr.I02427 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34736412-34738411 Eucalyptus grandis
Eucgr.I02427 2.0kb downstream 2.0kb downstream 5820 true Chr09: 34738412-34744231 Eucalyptus grandis
Eucgr.I02427 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34742232-34744231 Eucalyptus grandis
Eucgr.I02427 5.0kb upstream 5.0kb upstream 8820 true Chr09: 34733412-34742231 Eucalyptus grandis
Eucgr.I02427 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34733412-34738411 Eucalyptus grandis
Eucgr.I02427 5.0kb downstream 5.0kb downstream 8820 true Chr09: 34738412-34747231 Eucalyptus grandis
Eucgr.I02427 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34742232-34747231 Eucalyptus grandis
Eucgr.I02427 10.0kb upstream 10.0kb upstream 13820 true Chr09: 34728412-34742231 Eucalyptus grandis
Eucgr.I02427 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34728412-34738411 Eucalyptus grandis
Eucgr.I02427 10.0kb downstream 10.0kb downstream 13820 true Chr09: 34738412-34752231 Eucalyptus grandis
Eucgr.I02427 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34742232-34752231 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064248 5270 Rosid View MSA
123747341 5271 Pentapetalae View MSA
122790799 5272 Eudicot View MSA
122049170 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.6203 0.0 83.3032 High  
cufflinks 74.2345 0.0 189.751 High High
cufflinks 26.1042 0.0 66.5479 High Low
cufflinks 56.3519 0.0 140.737 High  
cufflinks 32.9458 0.0 83.6302    
cufflinks 36.7934 0.0 94.4726 High  

0 Strain