Gene : Eucgr.I02384 E. grandis v2.0
Defline:  (1 of 1) PTHR23421:SF79 - BETA-GALACTOSIDASE 3 Genomic Order:  2015
Name:  ? Eucgr.I02384 Secondary Identifier:  ? PAC:32063519
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02384 0.5kb upstream 0.5kb upstream 6794 true Chr09: 34246554-34253347 Eucalyptus grandis
Eucgr.I02384 0.5kb upstream 0.5kb upstream 500 false Chr09: 34252848-34253347 Eucalyptus grandis
Eucgr.I02384 0.5kb downstream 0.5kb downstream 6794 true Chr09: 34246054-34252847 Eucalyptus grandis
Eucgr.I02384 0.5kb downstream 0.5kb downstream 500 false Chr09: 34246054-34246553 Eucalyptus grandis
Eucgr.I02384 1.0kb upstream 1.0kb upstream 7294 true Chr09: 34246554-34253847 Eucalyptus grandis
Eucgr.I02384 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34252848-34253847 Eucalyptus grandis
Eucgr.I02384 1.0kb downstream 1.0kb downstream 7294 true Chr09: 34245554-34252847 Eucalyptus grandis
Eucgr.I02384 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34245554-34246553 Eucalyptus grandis
Eucgr.I02384 2.0kb upstream 2.0kb upstream 8294 true Chr09: 34246554-34254847 Eucalyptus grandis
Eucgr.I02384 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34252848-34254847 Eucalyptus grandis
Eucgr.I02384 2.0kb downstream 2.0kb downstream 8294 true Chr09: 34244554-34252847 Eucalyptus grandis
Eucgr.I02384 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34244554-34246553 Eucalyptus grandis
Eucgr.I02384 5.0kb upstream 5.0kb upstream 11294 true Chr09: 34246554-34257847 Eucalyptus grandis
Eucgr.I02384 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34252848-34257847 Eucalyptus grandis
Eucgr.I02384 5.0kb downstream 5.0kb downstream 11294 true Chr09: 34241554-34252847 Eucalyptus grandis
Eucgr.I02384 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34241554-34246553 Eucalyptus grandis
Eucgr.I02384 10.0kb upstream 10.0kb upstream 16294 true Chr09: 34246554-34262847 Eucalyptus grandis
Eucgr.I02384 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34252848-34262847 Eucalyptus grandis
Eucgr.I02384 10.0kb downstream 10.0kb downstream 16294 true Chr09: 34236554-34252847 Eucalyptus grandis
Eucgr.I02384 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34236554-34246553 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073116 5270 Rosid View MSA
123744970 5271 Pentapetalae View MSA
122787438 5272 Eudicot View MSA
122044679 5273 Angiosperm View MSA
121310326 5274 Embryophyte View MSA
123347842 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.4462 0.0 169.403 High High
cufflinks 36.7468 0.0 84.1205   Low
cufflinks 49.9013 0.0 116.736 High  
cufflinks 59.4692 0.0 141.767 High  
cufflinks 70.9171 0.0 171.283 High High
cufflinks 36.7896 0.0 83.7273 High Low

0 Strain