Gene : Eucgr.I02387 E. grandis v2.0
Defline:  (1 of 1) 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Genomic Order:  2018
Name:  ? Eucgr.I02387 Secondary Identifier:  ? PAC:32064796
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02387 0.5kb upstream 0.5kb upstream 3874 true Chr09: 34274773-34278646 Eucalyptus grandis
Eucgr.I02387 0.5kb upstream 0.5kb upstream 500 false Chr09: 34278147-34278646 Eucalyptus grandis
Eucgr.I02387 0.5kb downstream 0.5kb downstream 3874 true Chr09: 34274273-34278146 Eucalyptus grandis
Eucgr.I02387 0.5kb downstream 0.5kb downstream 500 false Chr09: 34274273-34274772 Eucalyptus grandis
Eucgr.I02387 1.0kb upstream 1.0kb upstream 4374 true Chr09: 34274773-34279146 Eucalyptus grandis
Eucgr.I02387 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34278147-34279146 Eucalyptus grandis
Eucgr.I02387 1.0kb downstream 1.0kb downstream 4374 true Chr09: 34273773-34278146 Eucalyptus grandis
Eucgr.I02387 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34273773-34274772 Eucalyptus grandis
Eucgr.I02387 2.0kb upstream 2.0kb upstream 5374 true Chr09: 34274773-34280146 Eucalyptus grandis
Eucgr.I02387 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34278147-34280146 Eucalyptus grandis
Eucgr.I02387 2.0kb downstream 2.0kb downstream 5374 true Chr09: 34272773-34278146 Eucalyptus grandis
Eucgr.I02387 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34272773-34274772 Eucalyptus grandis
Eucgr.I02387 5.0kb upstream 5.0kb upstream 8374 true Chr09: 34274773-34283146 Eucalyptus grandis
Eucgr.I02387 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34278147-34283146 Eucalyptus grandis
Eucgr.I02387 5.0kb downstream 5.0kb downstream 8374 true Chr09: 34269773-34278146 Eucalyptus grandis
Eucgr.I02387 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34269773-34274772 Eucalyptus grandis
Eucgr.I02387 10.0kb upstream 10.0kb upstream 13374 true Chr09: 34274773-34288146 Eucalyptus grandis
Eucgr.I02387 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34278147-34288146 Eucalyptus grandis
Eucgr.I02387 10.0kb downstream 10.0kb downstream 13374 true Chr09: 34264773-34278146 Eucalyptus grandis
Eucgr.I02387 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34264773-34274772 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062354 5270 Rosid View MSA
123737410 5271 Pentapetalae View MSA
122792758 5272 Eudicot View MSA
122047649 5273 Angiosperm View MSA
121350864 5274 Embryophyte View MSA
123427541 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.06001 0.0 7.67668    
cufflinks 1.66356 0.0 4.59225    
cufflinks 2.76722 0.0 7.02788    
cufflinks 1.23018 0.0 3.45612   Low
cufflinks 2.70385 0.0 6.8369    
cufflinks 8.52332 0.0 20.1375   High

0 Strain