Gene : Eucgr.I02307 E. grandis v2.0
Defline:  (1 of 6) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  1941
Name:  ? Eucgr.I02307 Secondary Identifier:  ? PAC:32063658
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLYOXYLATE-BYPASS Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY-561 Eucalyptus grandis pathologic  
Egrandis PWY-5690 Eucalyptus grandis pathologic  
Egrandis PWY-6549 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02307 0.5kb upstream 0.5kb upstream 7058 true Chr09: 33414574-33421631 Eucalyptus grandis
Eucgr.I02307 0.5kb upstream 0.5kb upstream 500 false Chr09: 33421132-33421631 Eucalyptus grandis
Eucgr.I02307 0.5kb downstream 0.5kb downstream 7058 true Chr09: 33414074-33421131 Eucalyptus grandis
Eucgr.I02307 0.5kb downstream 0.5kb downstream 500 false Chr09: 33414074-33414573 Eucalyptus grandis
Eucgr.I02307 1.0kb upstream 1.0kb upstream 7558 true Chr09: 33414574-33422131 Eucalyptus grandis
Eucgr.I02307 1.0kb upstream 1.0kb upstream 1000 false Chr09: 33421132-33422131 Eucalyptus grandis
Eucgr.I02307 1.0kb downstream 1.0kb downstream 7558 true Chr09: 33413574-33421131 Eucalyptus grandis
Eucgr.I02307 1.0kb downstream 1.0kb downstream 1000 false Chr09: 33413574-33414573 Eucalyptus grandis
Eucgr.I02307 2.0kb upstream 2.0kb upstream 8558 true Chr09: 33414574-33423131 Eucalyptus grandis
Eucgr.I02307 2.0kb upstream 2.0kb upstream 2000 false Chr09: 33421132-33423131 Eucalyptus grandis
Eucgr.I02307 2.0kb downstream 2.0kb downstream 8558 true Chr09: 33412574-33421131 Eucalyptus grandis
Eucgr.I02307 2.0kb downstream 2.0kb downstream 2000 false Chr09: 33412574-33414573 Eucalyptus grandis
Eucgr.I02307 5.0kb upstream 5.0kb upstream 11558 true Chr09: 33414574-33426131 Eucalyptus grandis
Eucgr.I02307 5.0kb upstream 5.0kb upstream 5000 false Chr09: 33421132-33426131 Eucalyptus grandis
Eucgr.I02307 5.0kb downstream 5.0kb downstream 11558 true Chr09: 33409574-33421131 Eucalyptus grandis
Eucgr.I02307 5.0kb downstream 5.0kb downstream 5000 false Chr09: 33409574-33414573 Eucalyptus grandis
Eucgr.I02307 10.0kb upstream 10.0kb upstream 16558 true Chr09: 33414574-33431131 Eucalyptus grandis
Eucgr.I02307 10.0kb upstream 10.0kb upstream 10000 false Chr09: 33421132-33431131 Eucalyptus grandis
Eucgr.I02307 10.0kb downstream 10.0kb downstream 16558 true Chr09: 33404574-33421131 Eucalyptus grandis
Eucgr.I02307 10.0kb downstream 10.0kb downstream 10000 false Chr09: 33404574-33414573 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069604 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.6462 0.0 120.532 High  
cufflinks 37.5695 0.0 99.505    
cufflinks 31.9964 0.0 82.9068 High Low
cufflinks 40.044 0.0 107.767 High  
cufflinks 32.6264 0.0 79.5103   Low
cufflinks 50.5783 0.0 139.269 High High

0 Strain