Gene : Eucgr.I02249 E. grandis v2.0
Defline:  (1 of 1) KOG2957 - Vacuolar H+-ATPase V0 sector, subunit d Genomic Order:  1400
Name:  ? Eucgr.I02249 Secondary Identifier:  ? PAC:32064387
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02249 0.5kb upstream 0.5kb upstream 6118 true Chr09: 26647922-26654039 Eucalyptus grandis
Eucgr.I02249 0.5kb upstream 0.5kb upstream 500 false Chr09: 26653540-26654039 Eucalyptus grandis
Eucgr.I02249 0.5kb downstream 0.5kb downstream 6118 true Chr09: 26647422-26653539 Eucalyptus grandis
Eucgr.I02249 0.5kb downstream 0.5kb downstream 500 false Chr09: 26647422-26647921 Eucalyptus grandis
Eucgr.I02249 1.0kb upstream 1.0kb upstream 6618 true Chr09: 26647922-26654539 Eucalyptus grandis
Eucgr.I02249 1.0kb upstream 1.0kb upstream 1000 false Chr09: 26653540-26654539 Eucalyptus grandis
Eucgr.I02249 1.0kb downstream 1.0kb downstream 6618 true Chr09: 26646922-26653539 Eucalyptus grandis
Eucgr.I02249 1.0kb downstream 1.0kb downstream 1000 false Chr09: 26646922-26647921 Eucalyptus grandis
Eucgr.I02249 2.0kb upstream 2.0kb upstream 7618 true Chr09: 26647922-26655539 Eucalyptus grandis
Eucgr.I02249 2.0kb upstream 2.0kb upstream 2000 false Chr09: 26653540-26655539 Eucalyptus grandis
Eucgr.I02249 2.0kb downstream 2.0kb downstream 7618 true Chr09: 26645922-26653539 Eucalyptus grandis
Eucgr.I02249 2.0kb downstream 2.0kb downstream 2000 false Chr09: 26645922-26647921 Eucalyptus grandis
Eucgr.I02249 5.0kb upstream 5.0kb upstream 10618 true Chr09: 26647922-26658539 Eucalyptus grandis
Eucgr.I02249 5.0kb upstream 5.0kb upstream 5000 false Chr09: 26653540-26658539 Eucalyptus grandis
Eucgr.I02249 5.0kb downstream 5.0kb downstream 10618 true Chr09: 26642922-26653539 Eucalyptus grandis
Eucgr.I02249 5.0kb downstream 5.0kb downstream 5000 false Chr09: 26642922-26647921 Eucalyptus grandis
Eucgr.I02249 10.0kb upstream 10.0kb upstream 15618 true Chr09: 26647922-26663539 Eucalyptus grandis
Eucgr.I02249 10.0kb upstream 10.0kb upstream 10000 false Chr09: 26653540-26663539 Eucalyptus grandis
Eucgr.I02249 10.0kb downstream 10.0kb downstream 15618 true Chr09: 26637922-26653539 Eucalyptus grandis
Eucgr.I02249 10.0kb downstream 10.0kb downstream 10000 false Chr09: 26637922-26647921 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065072 5270 Rosid View MSA
123742149 5271 Pentapetalae View MSA
122786040 5272 Eudicot View MSA
122045239 5273 Angiosperm View MSA
121345158 5274 Embryophyte View MSA
123427776 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.1758 0.0 79.4168 High  
cufflinks 84.7953 0.0 197.425 High High
cufflinks 36.2817 0.0 81.809 High  
cufflinks 86.3152 0.0 199.899 High High
cufflinks 39.2178 0.0 88.1027 High  
cufflinks 44.7612 0.0 121.848 High  

0 Strain