Gene : Eucgr.I02163 E. grandis v2.0
Defline:  (1 of 1) 2.6.1.2 - Alanine transaminase / Glutamic--pyruvic transaminase Genomic Order:  1834
Name:  ? Eucgr.I02163 Secondary Identifier:  ? PAC:32064142
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ALANINE-DEG3-PWY Eucalyptus grandis pathologic  
Egrandis ALANINE-SYN2-PWY Eucalyptus grandis pathologic  
Egrandis PWY-7115 Eucalyptus grandis pathologic  
Egrandis PWY-7117 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02163 0.5kb upstream 0.5kb upstream 6649 true Chr09: 31492492-31499140 Eucalyptus grandis
Eucgr.I02163 0.5kb upstream 0.5kb upstream 500 false Chr09: 31498641-31499140 Eucalyptus grandis
Eucgr.I02163 0.5kb downstream 0.5kb downstream 6649 true Chr09: 31491992-31498640 Eucalyptus grandis
Eucgr.I02163 0.5kb downstream 0.5kb downstream 500 false Chr09: 31491992-31492491 Eucalyptus grandis
Eucgr.I02163 1.0kb upstream 1.0kb upstream 7149 true Chr09: 31492492-31499640 Eucalyptus grandis
Eucgr.I02163 1.0kb upstream 1.0kb upstream 1000 false Chr09: 31498641-31499640 Eucalyptus grandis
Eucgr.I02163 1.0kb downstream 1.0kb downstream 7149 true Chr09: 31491492-31498640 Eucalyptus grandis
Eucgr.I02163 1.0kb downstream 1.0kb downstream 1000 false Chr09: 31491492-31492491 Eucalyptus grandis
Eucgr.I02163 2.0kb upstream 2.0kb upstream 8149 true Chr09: 31492492-31500640 Eucalyptus grandis
Eucgr.I02163 2.0kb upstream 2.0kb upstream 2000 false Chr09: 31498641-31500640 Eucalyptus grandis
Eucgr.I02163 2.0kb downstream 2.0kb downstream 8149 true Chr09: 31490492-31498640 Eucalyptus grandis
Eucgr.I02163 2.0kb downstream 2.0kb downstream 2000 false Chr09: 31490492-31492491 Eucalyptus grandis
Eucgr.I02163 5.0kb upstream 5.0kb upstream 11149 true Chr09: 31492492-31503640 Eucalyptus grandis
Eucgr.I02163 5.0kb upstream 5.0kb upstream 5000 false Chr09: 31498641-31503640 Eucalyptus grandis
Eucgr.I02163 5.0kb downstream 5.0kb downstream 11149 true Chr09: 31487492-31498640 Eucalyptus grandis
Eucgr.I02163 5.0kb downstream 5.0kb downstream 5000 false Chr09: 31487492-31492491 Eucalyptus grandis
Eucgr.I02163 10.0kb upstream 10.0kb upstream 16149 true Chr09: 31492492-31508640 Eucalyptus grandis
Eucgr.I02163 10.0kb upstream 10.0kb upstream 10000 false Chr09: 31498641-31508640 Eucalyptus grandis
Eucgr.I02163 10.0kb downstream 10.0kb downstream 16149 true Chr09: 31482492-31498640 Eucalyptus grandis
Eucgr.I02163 10.0kb downstream 10.0kb downstream 10000 false Chr09: 31482492-31492491 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064256 5270 Rosid View MSA
123749170 5271 Pentapetalae View MSA
122793882 5272 Eudicot View MSA
122043472 5273 Angiosperm View MSA
121347513 5274 Embryophyte View MSA
123427750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.8945 0.0 105.488 High High
cufflinks 24.1174 0.0 53.357    
cufflinks 31.9875 0.0 71.0409 High  
cufflinks 20.7319 0.0 45.8485    
cufflinks 38.3278 0.0 85.6104 High  
cufflinks 13.9595 0.0 31.121   Low

0 Strain