Gene : Eucgr.I02165 E. grandis v2.0
Defline:  (1 of 3) PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3 Genomic Order:  1836
Name:  ? Eucgr.I02165 Secondary Identifier:  ? PAC:32062815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02165 0.5kb upstream 0.5kb upstream 1991 true Chr09: 31545800-31547790 Eucalyptus grandis
Eucgr.I02165 0.5kb upstream 0.5kb upstream 500 false Chr09: 31547291-31547790 Eucalyptus grandis
Eucgr.I02165 0.5kb downstream 0.5kb downstream 1991 true Chr09: 31545300-31547290 Eucalyptus grandis
Eucgr.I02165 0.5kb downstream 0.5kb downstream 500 false Chr09: 31545300-31545799 Eucalyptus grandis
Eucgr.I02165 1.0kb upstream 1.0kb upstream 2491 true Chr09: 31545800-31548290 Eucalyptus grandis
Eucgr.I02165 1.0kb upstream 1.0kb upstream 1000 false Chr09: 31547291-31548290 Eucalyptus grandis
Eucgr.I02165 1.0kb downstream 1.0kb downstream 2491 true Chr09: 31544800-31547290 Eucalyptus grandis
Eucgr.I02165 1.0kb downstream 1.0kb downstream 1000 false Chr09: 31544800-31545799 Eucalyptus grandis
Eucgr.I02165 2.0kb upstream 2.0kb upstream 3491 true Chr09: 31545800-31549290 Eucalyptus grandis
Eucgr.I02165 2.0kb upstream 2.0kb upstream 2000 false Chr09: 31547291-31549290 Eucalyptus grandis
Eucgr.I02165 2.0kb downstream 2.0kb downstream 3491 true Chr09: 31543800-31547290 Eucalyptus grandis
Eucgr.I02165 2.0kb downstream 2.0kb downstream 2000 false Chr09: 31543800-31545799 Eucalyptus grandis
Eucgr.I02165 5.0kb upstream 5.0kb upstream 6491 true Chr09: 31545800-31552290 Eucalyptus grandis
Eucgr.I02165 5.0kb upstream 5.0kb upstream 5000 false Chr09: 31547291-31552290 Eucalyptus grandis
Eucgr.I02165 5.0kb downstream 5.0kb downstream 6491 true Chr09: 31540800-31547290 Eucalyptus grandis
Eucgr.I02165 5.0kb downstream 5.0kb downstream 5000 false Chr09: 31540800-31545799 Eucalyptus grandis
Eucgr.I02165 10.0kb upstream 10.0kb upstream 11491 true Chr09: 31545800-31557290 Eucalyptus grandis
Eucgr.I02165 10.0kb upstream 10.0kb upstream 10000 false Chr09: 31547291-31557290 Eucalyptus grandis
Eucgr.I02165 10.0kb downstream 10.0kb downstream 11491 true Chr09: 31535800-31547290 Eucalyptus grandis
Eucgr.I02165 10.0kb downstream 10.0kb downstream 10000 false Chr09: 31535800-31545799 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069328 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.669198 0.0 2.08191   Low
cufflinks 4.40737 0.0 11.1902    
cufflinks 1.80494 0.0 5.02679    
cufflinks 7.34538 0.0 17.7343    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.79665 0.0 12.1686    

0 Strain