Gene : Eucgr.I02779 E. grandis v2.0
Defline:  (1 of 1) PTHR11208//PTHR11208:SF48 - RNA-BINDING PROTEIN RELATED Genomic Order:  2354
Name:  ? Eucgr.I02779 Secondary Identifier:  ? PAC:32064384
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02779 0.5kb upstream 0.5kb upstream 4696 true Chr09: 38594907-38599602 Eucalyptus grandis
Eucgr.I02779 0.5kb upstream 0.5kb upstream 500 false Chr09: 38594907-38595406 Eucalyptus grandis
Eucgr.I02779 0.5kb downstream 0.5kb downstream 4696 true Chr09: 38595407-38600102 Eucalyptus grandis
Eucgr.I02779 0.5kb downstream 0.5kb downstream 500 false Chr09: 38599603-38600102 Eucalyptus grandis
Eucgr.I02779 1.0kb upstream 1.0kb upstream 5196 true Chr09: 38594407-38599602 Eucalyptus grandis
Eucgr.I02779 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38594407-38595406 Eucalyptus grandis
Eucgr.I02779 1.0kb downstream 1.0kb downstream 5196 true Chr09: 38595407-38600602 Eucalyptus grandis
Eucgr.I02779 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38599603-38600602 Eucalyptus grandis
Eucgr.I02779 2.0kb upstream 2.0kb upstream 6196 true Chr09: 38593407-38599602 Eucalyptus grandis
Eucgr.I02779 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38593407-38595406 Eucalyptus grandis
Eucgr.I02779 2.0kb downstream 2.0kb downstream 6196 true Chr09: 38595407-38601602 Eucalyptus grandis
Eucgr.I02779 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38599603-38601602 Eucalyptus grandis
Eucgr.I02779 5.0kb upstream 5.0kb upstream 9196 true Chr09: 38590407-38599602 Eucalyptus grandis
Eucgr.I02779 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38590407-38595406 Eucalyptus grandis
Eucgr.I02779 5.0kb downstream 5.0kb downstream 9196 true Chr09: 38595407-38604602 Eucalyptus grandis
Eucgr.I02779 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38599603-38604602 Eucalyptus grandis
Eucgr.I02779 10.0kb upstream 10.0kb upstream 14196 true Chr09: 38585407-38599602 Eucalyptus grandis
Eucgr.I02779 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38585407-38595406 Eucalyptus grandis
Eucgr.I02779 10.0kb downstream 10.0kb downstream 14196 true Chr09: 38595407-38609602 Eucalyptus grandis
Eucgr.I02779 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38599603-38609602 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064497 5270 Rosid View MSA
123743356 5271 Pentapetalae View MSA
122788598 5272 Eudicot View MSA
122041974 5273 Angiosperm View MSA
121350686 5274 Embryophyte View MSA
123426021 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2824 0.0 25.9755   Low
cufflinks 20.4297 0.0 45.4448   High
cufflinks 12.2103 0.0 27.8661    
cufflinks 12.1059 0.0 27.5815    
cufflinks 17.5645 0.0 39.3259    
cufflinks 16.7431 0.0 37.7003    

0 Strain