Gene : Eucgr.I02677 E. grandis v2.0
Defline:  (1 of 2) PTHR21649//PTHR21649:SF28 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  2260
Name:  ? Eucgr.I02677 Secondary Identifier:  ? PAC:32062901
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02677 0.5kb upstream 0.5kb upstream 1778 true Chr09: 37789408-37791185 Eucalyptus grandis
Eucgr.I02677 0.5kb upstream 0.5kb upstream 500 false Chr09: 37790686-37791185 Eucalyptus grandis
Eucgr.I02677 0.5kb downstream 0.5kb downstream 1778 true Chr09: 37788908-37790685 Eucalyptus grandis
Eucgr.I02677 0.5kb downstream 0.5kb downstream 500 false Chr09: 37788908-37789407 Eucalyptus grandis
Eucgr.I02677 1.0kb upstream 1.0kb upstream 2278 true Chr09: 37789408-37791685 Eucalyptus grandis
Eucgr.I02677 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37790686-37791685 Eucalyptus grandis
Eucgr.I02677 1.0kb downstream 1.0kb downstream 2278 true Chr09: 37788408-37790685 Eucalyptus grandis
Eucgr.I02677 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37788408-37789407 Eucalyptus grandis
Eucgr.I02677 2.0kb upstream 2.0kb upstream 3278 true Chr09: 37789408-37792685 Eucalyptus grandis
Eucgr.I02677 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37790686-37792685 Eucalyptus grandis
Eucgr.I02677 2.0kb downstream 2.0kb downstream 3278 true Chr09: 37787408-37790685 Eucalyptus grandis
Eucgr.I02677 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37787408-37789407 Eucalyptus grandis
Eucgr.I02677 5.0kb upstream 5.0kb upstream 6278 true Chr09: 37789408-37795685 Eucalyptus grandis
Eucgr.I02677 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37790686-37795685 Eucalyptus grandis
Eucgr.I02677 5.0kb downstream 5.0kb downstream 6278 true Chr09: 37784408-37790685 Eucalyptus grandis
Eucgr.I02677 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37784408-37789407 Eucalyptus grandis
Eucgr.I02677 10.0kb upstream 10.0kb upstream 11278 true Chr09: 37789408-37800685 Eucalyptus grandis
Eucgr.I02677 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37790686-37800685 Eucalyptus grandis
Eucgr.I02677 10.0kb downstream 10.0kb downstream 11278 true Chr09: 37779408-37790685 Eucalyptus grandis
Eucgr.I02677 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37779408-37789407 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124048178 5270 Rosid Singleton cluster - no MSA
123745282 5271 Pentapetalae View MSA
122788201 5272 Eudicot View MSA
122042531 5273 Angiosperm View MSA
121350849 5274 Embryophyte View MSA
123381903 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.5318 0.0 69.8149 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 16.5776 0.0 37.5707    
cufflinks 0.155481 0.0 0.585812 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 137.629 0.0 321.177 High  

0 Strain