Gene : Eucgr.I02659 E. grandis v2.0
Defline:  (1 of 7) KOG1546 - Metacaspase involved in regulation of apoptosis Genomic Order:  2242
Name:  ? Eucgr.I02659 Secondary Identifier:  ? PAC:32064910
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02659 0.5kb upstream 0.5kb upstream 3461 true Chr09: 37679066-37682526 Eucalyptus grandis
Eucgr.I02659 0.5kb upstream 0.5kb upstream 500 false Chr09: 37679066-37679565 Eucalyptus grandis
Eucgr.I02659 0.5kb downstream 0.5kb downstream 3461 true Chr09: 37679566-37683026 Eucalyptus grandis
Eucgr.I02659 0.5kb downstream 0.5kb downstream 500 false Chr09: 37682527-37683026 Eucalyptus grandis
Eucgr.I02659 1.0kb upstream 1.0kb upstream 3961 true Chr09: 37678566-37682526 Eucalyptus grandis
Eucgr.I02659 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37678566-37679565 Eucalyptus grandis
Eucgr.I02659 1.0kb downstream 1.0kb downstream 3961 true Chr09: 37679566-37683526 Eucalyptus grandis
Eucgr.I02659 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37682527-37683526 Eucalyptus grandis
Eucgr.I02659 2.0kb upstream 2.0kb upstream 4961 true Chr09: 37677566-37682526 Eucalyptus grandis
Eucgr.I02659 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37677566-37679565 Eucalyptus grandis
Eucgr.I02659 2.0kb downstream 2.0kb downstream 4961 true Chr09: 37679566-37684526 Eucalyptus grandis
Eucgr.I02659 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37682527-37684526 Eucalyptus grandis
Eucgr.I02659 5.0kb upstream 5.0kb upstream 7961 true Chr09: 37674566-37682526 Eucalyptus grandis
Eucgr.I02659 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37674566-37679565 Eucalyptus grandis
Eucgr.I02659 5.0kb downstream 5.0kb downstream 7961 true Chr09: 37679566-37687526 Eucalyptus grandis
Eucgr.I02659 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37682527-37687526 Eucalyptus grandis
Eucgr.I02659 10.0kb upstream 10.0kb upstream 12961 true Chr09: 37669566-37682526 Eucalyptus grandis
Eucgr.I02659 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37669566-37679565 Eucalyptus grandis
Eucgr.I02659 10.0kb downstream 10.0kb downstream 12961 true Chr09: 37679566-37692526 Eucalyptus grandis
Eucgr.I02659 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37682527-37692526 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027947 5273 Angiosperm View MSA
124051183 5270 Rosid View MSA
123753362 5271 Pentapetalae View MSA
122775074 5272 Eudicot View MSA
123428899 5275 Viridiplantae View MSA
121350269 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.27912 0.0 6.76526    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.60489 0.0 7.42101    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.06355 0.0 5.12975    
cufflinks 9.83726 0.0 32.24   High

0 Strain